RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 TNFRSF10AO00220 468 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 EI24O14681 340 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 RGS5O15539 181 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 CLPXO76031 633 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 MICAL2O94851 1124 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 ERBB2P04626 1255 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 GSNP06396 782 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 ETV4P43268 484 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 SLC7A2P52569 658 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 STX1BP61266 288 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 RBP5P82980 135 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 SP3Q02447 781 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 PTPN11Q06124 597 aaPredicted RBP11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 NOGQ13253 232 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 CCDC142Q17RM4 750 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 RWDD4Q6NW29 188 aaKnown RBP11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 TNIP2Q8NFZ5 429 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 LILRB4Q8NHJ6 448 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 UBA3Q8TBC4 463 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 FEM1CQ96JP0 617 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 CEP19Q96LK0 163 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 DPEP3Q9H4B8 488 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 TMEM216Q9P0N5 145 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 COPG2Q9UBF2 871 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 SNX9Q9Y5X1 595 aa11.9□□□□□ -0.5
RBFOX1-224ENST00000641259 SOCS2O14508 198 aa11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 GRIA1P42261 906 aa11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 MRPS5P82675 430 aaKnown RBP11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 MRPS6P82932 125 aaKnown RBP11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 INCA1Q0VD86 236 aa11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 KYAT1Q16773 422 aa11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 CYP51A1Q16850 503 aa11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 ABRAXAS1Q6UWZ7 409 aa11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 CDH24Q86UP0 819 aa11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 STK32CQ86UX6 486 aa11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 TMEM35BQ8NCS4 154 aa11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 PIWIL1Q96J94 861 aaKnown RBP11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 TMEM246Q9BRR3 403 aa11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 CDH19Q9H159 772 aa11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 AGO3Q9H9G7 860 aaKnown RBP11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 MAGEE1Q9HCI5 957 aa11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.9□□□□□ -0.51
RBFOX1-224ENST00000641259 PTGESO14684 152 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 PFKMP08237 780 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 PTGS2P35354 604 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 TEDDM1Q5T9Z0 273 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 C9orf57Q5W0N0 161 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 CES4AQ5XG92 561 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 CYP20A1Q6UW02 462 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 MMAAQ8IVH4 418 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 NATD1Q8N6N6 113 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 KLHDC9Q8NEP7 349 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 MCRS1Q96EZ8 462 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 SMOXQ9NWM0 555 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 STMN3Q9NZ72 180 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 OAZ3Q9UMX2 235 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 TMEM233B4DJY2 109 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 LSM8O95777 96 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 IL7RP16871 459 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 STMN1P16949 149 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 GTF2E2P29084 291 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 SERPINH1P50454 418 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 MGAT3Q09327 533 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 SOWAHAQ2M3V2 549 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 DEFB115Q30KQ5 88 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 LSM12Q3MHD2 195 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 ZFP69Q49AA0 526 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 KDELC2Q7Z4H8 507 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 SERINC5Q86VE9 423 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 LGI2Q8N0V4 545 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 LZTR1Q8N653 840 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 JOSD2Q8TAC2 188 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 LPPQ93052 612 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 RTKNQ9BST9 563 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 TRMT13Q9NUP7 481 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 TOR4AQ9NXH8 423 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 TMEM191CA6NGB0 347 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 TNFRSF21O75509 655 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 TOMM70O94826 608 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 ARSAP15289 507 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 GARSP41250 739 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 CDC42EP1Q00587 391 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 CHSY3Q70JA7 882 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 LYSMD3Q7Z3D4 306 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 KATNAL2Q8IYT4 538 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 SLC38A6Q8IZM9 456 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 MPP5Q8N3R9 675 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 MAPK15Q8TD08 544 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 ZFP90Q8TF47 636 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 CHPT1Q8WUD6 406 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 HEXIM2Q96MH2 286 aaKnown RBP11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 FERD3LQ96RJ6 166 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 C1orf21Q9H246 121 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 OLAHQ9NV23 265 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 MTRRQ9UBK8 725 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 ST3GAL5Q9UNP4 418 aa11.89□□□□□ -0.51
RBFOX1-224ENST00000641259 KPNA7A9QM74 516 aa11.88□□□□□ -0.51
RBFOX1-224ENST00000641259 NR5A2O00482 541 aa11.88□□□□□ -0.51
RBFOX1-224ENST00000641259 SYNCRIPO60506 623 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms