RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 PSKH2Q96QS6 385 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 SPON2Q9BUD6 331 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 UBA2Q9UBT2 640 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-211ENST00000641213 SEPT3Q9UH03 358 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 PPM1HQ9ULR3 514 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 SDHDO14521 159 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 KDELR3O43731 214 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 PQBP1O60828 265 aaKnown RBP17.11■□□□□ 0.33
PHGDH-211ENST00000641213 FDXRP22570 491 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 SP100P23497 879 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-211ENST00000641213 RGRP47804 291 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 KCNC1P48547 511 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 SGSHP51688 502 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 PLK1P53350 603 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 OXCT1P55809 520 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 TIAL1Q01085 375 aaKnown RBP eCLIP17.11■□□□□ 0.33
PHGDH-211ENST00000641213 CCNIQ14094 377 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 MRNIPQ6NTE8 343 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 AAGABQ6PD74 315 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 KLHDC10Q6PID8 442 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 RPS27LQ71UM5 84 aaKnown RBP17.11■□□□□ 0.33
PHGDH-211ENST00000641213 ISCA2Q86U28 154 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 HPS6Q86YV9 775 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 EFCAB3Q8N7B9 438 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 PPFIBP2Q8ND30 876 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 PLD4Q96BZ4 506 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 PHF21BQ96EK2 531 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 MARK4Q96L34 752 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 TTC1Q99614 292 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 CINPQ9BW66 212 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-211ENST00000641213 ALG9Q9H6U8 611 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 RIMKLBQ9ULI2 386 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 POMPQ9Y244 141 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 BACE2Q9Y5Z0 518 aa17.11■□□□□ 0.33
PHGDH-211ENST00000641213 AIM2O14862 343 aa17.1■□□□□ 0.33
PHGDH-211ENST00000641213 CLDN11O75508 207 aa17.1■□□□□ 0.33
PHGDH-211ENST00000641213 STC2O76061 302 aa17.1■□□□□ 0.33
PHGDH-211ENST00000641213 SLC4A1P02730 911 aa17.1■□□□□ 0.33
PHGDH-211ENST00000641213 MTTPP55157 894 aa17.1■□□□□ 0.33
PHGDH-211ENST00000641213 CCL23P55773 120 aa17.1■□□□□ 0.33
PHGDH-211ENST00000641213 CYLC2Q14093 348 aaPredicted RBP17.1■□□□□ 0.33
PHGDH-211ENST00000641213 SLC22A9Q8IVM8 553 aa17.1■□□□□ 0.33
PHGDH-211ENST00000641213 OR4L1Q8NH43 312 aa17.1■□□□□ 0.33
PHGDH-211ENST00000641213 CCDC124Q96CT7 223 aaKnown RBP17.1■□□□□ 0.33
PHGDH-211ENST00000641213 EML4Q9HC35 981 aaKnown RBP17.1■□□□□ 0.33
PHGDH-211ENST00000641213 S100A14Q9HCY8 104 aa17.1■□□□□ 0.33
PHGDH-211ENST00000641213 TNFRSF12AQ9NP84 129 aa17.1■□□□□ 0.33
PHGDH-211ENST00000641213 GKN1Q9NS71 199 aa17.1■□□□□ 0.33
PHGDH-211ENST00000641213 CATSPERZQ9NTU4 200 aa17.1■□□□□ 0.33
PHGDH-211ENST00000641213 UPP2O95045 317 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 CXCL10P02778 98 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 CORO1AP31146 461 aaKnown RBP17.09■□□□□ 0.33
PHGDH-211ENST00000641213 NUDT2P50583 147 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 SCNN1BP51168 640 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 ILF2Q12905 390 aaKnown RBP17.09■□□□□ 0.33
PHGDH-211ENST00000641213 SETD3Q86TU7 594 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-211ENST00000641213 RNF168Q8IYW5 571 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-211ENST00000641213 CLSTN3Q9BQT9 956 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 ZBTB26Q9HCK0 441 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 NDE1Q9NXR1 346 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 CORO1CQ9ULV4 474 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-211ENST00000641213 FIS1Q9Y3D6 152 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 COPG1Q9Y678 874 aaKnown RBP17.09■□□□□ 0.33
PHGDH-211ENST00000641213 OBSL1O75147 1896 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 ILVBLA1L0T0 632 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 MAP3K7O43318 606 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 CR2P20023 1033 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 OGNP20774 298 aaKnown RBP17.09■□□□□ 0.33
PHGDH-211ENST00000641213 IMPDH1P20839 514 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 SATB1Q01826 763 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 GALNT1Q10472 559 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-211ENST00000641213 HERC3Q15034 1050 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 ZRSR2Q15696 482 aaKnown RBP17.09■□□□□ 0.33
PHGDH-211ENST00000641213 TCHHL1Q5QJ38 904 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-211ENST00000641213 ANO7Q6IWH7 933 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 CUZD1Q86UP6 607 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 KYQ8NBH2 561 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 CEP70Q8NHQ1 597 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 PTERQ96BW5 349 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 CDKN2AIPNLQ96HQ2 116 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 IGSF21Q96ID5 467 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 FAR2Q96K12 515 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 EXOC2Q96KP1 924 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 GSTO2Q9H4Y5 243 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 CXorf56Q9H5V9 222 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 CWH43Q9H720 699 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 NLE1Q9NVX2 485 aaPredicted RBP17.09■□□□□ 0.33
PHGDH-211ENST00000641213 AFF4Q9UHB7 1163 aaKnown RBP17.09■□□□□ 0.33
PHGDH-211ENST00000641213 SPO11Q9Y5K1 396 aa17.09■□□□□ 0.33
PHGDH-211ENST00000641213 INSIG1O15503 277 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 SKAP2O75563 359 aaPredicted RBP17.08■□□□□ 0.33
PHGDH-211ENST00000641213 BAG2O95816 211 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 RHOCP08134 193 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 CD1DP15813 335 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 ZNF140P52738 457 aaPredicted RBP17.08■□□□□ 0.33
PHGDH-211ENST00000641213 STC1P52823 247 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 BLMHQ13867 455 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.08■□□□□ 0.33
PHGDH-211ENST00000641213 DEFB128Q7Z7B8 93 aa17.08■□□□□ 0.33
PHGDH-211ENST00000641213 KBTBD2Q8IY47 623 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms