RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 POU2F2P09086 479 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 HLA-FP30511 346 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 ABL2P42684 1182 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 GRIA4P48058 902 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 PGGT1BP53609 377 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 NTHL1P78549 312 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 BCL2L1Q07817 233 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 BNIP1Q12981 228 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 FAM83EQ2M2I3 478 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 PITRM1Q5JRX3 1037 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 HECTD2Q5U5R9 776 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 AFTPHQ6ULP2 937 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 FSTL5Q8N475 847 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-208ENST00000641023 IRF7Q92985 503 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 ERP27Q96DN0 273 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 SIKE1Q9BRV8 207 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 BBS2Q9BXC9 721 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 ZNF395Q9H8N7 513 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-208ENST00000641023 GPAMQ9HCL2 828 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 KCNK4Q9NYG8 393 aa17.32■□□□□ 0.36
PHGDH-208ENST00000641023 DOCK6Q96HP0 2047 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 NEDD8-MDP1E9PL57 170 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 TRIM13O60858 407 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 H2AFYO75367 372 aaKnown RBP17.31■□□□□ 0.36
PHGDH-208ENST00000641023 IGSF6O95976 241 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 PENKP01210 267 aaPredicted RBP17.31■□□□□ 0.36
PHGDH-208ENST00000641023 PSMA3P25788 255 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 GLRBP48167 497 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 C9orf50Q5SZB4 431 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 FAM45BPQ6NSW5 357 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 WDR75Q8IWA0 830 aaKnown RBP17.31■□□□□ 0.36
PHGDH-208ENST00000641023 EFHBQ8N7U6 833 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 RIN3Q8TB24 985 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 PIWIL2Q8TC59 973 aaKnown RBP17.31■□□□□ 0.36
PHGDH-208ENST00000641023 FAM45AQ8TCE6 357 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 NXNL1Q96CM4 212 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 OTUB2Q96DC9 234 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 TMEM120AQ9BXJ8 343 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 PIDD1Q9HB75 910 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 SPHK2Q9NRA0 654 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 OXSMQ9NWU1 459 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 CRYL1Q9Y2S2 319 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 MRPS23Q9Y3D9 190 aaKnown RBP17.31■□□□□ 0.36
PHGDH-208ENST00000641023 MYO7AQ13402 2215 aa17.31■□□□□ 0.36
PHGDH-208ENST00000641023 H0YHG0 523 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 STX7O15400 261 aaKnown RBP17.3■□□□□ 0.36
PHGDH-208ENST00000641023 PGLSO95336 258 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 PRAMEF12O95522 483 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 MAGEA9P43362 315 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 STC1P52823 247 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 PRKAA2P54646 552 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 RPL26P61254 145 aaKnown RBP17.3■□□□□ 0.36
PHGDH-208ENST00000641023 ERVK-21P61565 698 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 ZNF77Q15935 545 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 FAM109BQ6ICB4 259 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-208ENST00000641023 LRRC8EQ6NSJ5 796 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 CAMK1DQ8IU85 385 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 TMEM151AQ8N4L1 468 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 PAF1Q8N7H5 531 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 LMLNQ96KR4 655 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 OLFM1Q99784 485 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 MYLK2Q9H1R3 596 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 MAGEE1Q9HCI5 957 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 INTS10Q9NVR2 710 aaKnown RBP17.3■□□□□ 0.36
PHGDH-208ENST00000641023 EVLQ9UI08 416 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-208ENST00000641023 RPL26L1Q9UNX3 145 aaKnown RBP17.3■□□□□ 0.36
PHGDH-208ENST00000641023 CAPN7Q9Y6W3 813 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 TK2O00142 265 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 PFDN6O15212 129 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 DNAJC6O75061 913 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 SLC4A1P02730 911 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 KITP10721 976 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 TCF3P15923 654 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 ABCE1P61221 599 aaKnown RBP17.3■□□□□ 0.36
PHGDH-208ENST00000641023 SNRPD1P62314 119 aaKnown RBP17.3■□□□□ 0.36
PHGDH-208ENST00000641023 TYSND1Q2T9J0 566 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 AGAP9Q5VTM2 703 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 ZYG11AQ6WRX3 759 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 C10orf67Q8IYJ2 551 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 MICALL1Q8N3F8 863 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 PNPLA1Q8N8W4 532 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 OR2AP1Q8NGE2 309 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 OR6Y1Q8NGX8 325 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 OR6K2Q8NGY2 324 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 ZNF707Q96C28 371 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-208ENST00000641023 MYO19Q96H55 970 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 RPL10LQ96L21 214 aaKnown RBP17.3■□□□□ 0.36
PHGDH-208ENST00000641023 TCF12Q99081 682 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 MRPL57Q9BQC6 102 aaKnown RBP17.3■□□□□ 0.36
PHGDH-208ENST00000641023 MRPL46Q9H2W6 279 aaKnown RBP17.3■□□□□ 0.36
PHGDH-208ENST00000641023 ATP13A3Q9H7F0 1226 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 XPR1Q9UBH6 696 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 HS3ST2Q9Y278 367 aa17.3■□□□□ 0.36
PHGDH-208ENST00000641023 HELZP42694 1942 aaKnown RBP17.3■□□□□ 0.36
PHGDH-208ENST00000641023 ITM2AO43736 263 aa17.29■□□□□ 0.36
PHGDH-208ENST00000641023 SOCS5O75159 536 aa17.29■□□□□ 0.36
PHGDH-208ENST00000641023 SLC26A3P40879 764 aa17.29■□□□□ 0.36
PHGDH-208ENST00000641023 SPDYAQ5MJ70 313 aa17.29■□□□□ 0.36
PHGDH-208ENST00000641023 KLC3Q6P597 504 aa17.29■□□□□ 0.36
PHGDH-208ENST00000641023 MTDHQ86UE4 582 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms