RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ARL2P36404 184 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 RPS9P46781 194 aaKnown RBP13.8□□□□□ -0.2
SCARB2-227ENST00000640957 SAMD4BQ5PRF9 694 aaKnown RBP13.8□□□□□ -0.2
SCARB2-227ENST00000640957 FUNDC1Q8IVP5 155 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 ZCCHC7Q8N3Z6 543 aaKnown RBP13.8□□□□□ -0.2
SCARB2-227ENST00000640957 TNIP2Q8NFZ5 429 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 FDXACB1Q9BRP7 624 aaPredicted RBP13.8□□□□□ -0.2
SCARB2-227ENST00000640957 TBC1D13Q9NVG8 400 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 DPP3Q9NY33 737 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 GNPTGQ9UJJ9 305 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 GPSM3Q9Y4H4 160 aa13.8□□□□□ -0.2
SCARB2-227ENST00000640957 A0A0J9YYE9 177 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 PFDN6O15212 129 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 GUCY1B2O75343 617 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 NADKO95544 446 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-227ENST00000640957 DLGAP3O95886 979 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 JCHAINP01591 159 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 ALBP02768 609 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 TCF3P15923 654 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 NFKB1P19838 968 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 GALNT2Q10471 571 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 GRB7Q14451 532 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 STXBP5Q5T5C0 1151 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 ESRP1Q6NXG1 681 aaKnown RBP13.79□□□□□ -0.2
SCARB2-227ENST00000640957 CATSPERGQ6ZRH7 1159 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 ILDR2Q71H61 639 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 SPATC1Q76KD6 591 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 CUZD1Q86UP6 607 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 DEPDC4Q8N2C3 294 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 C1orf50Q9BV19 199 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 SMPD3Q9NY59 655 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-227ENST00000640957 SLCO3A1Q9UIG8 710 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 ZFC3H1O60293 1989 aaKnown RBP13.79□□□□□ -0.2
SCARB2-227ENST00000640957 SNAP91O60641 907 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 JRKO75564 520 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 SLC6A3Q01959 620 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 DEPDC1Q5TB30 811 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 TMEM126BQ8IUX1 230 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 ALDH16A1Q8IZ83 802 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 CPSF7Q8N684 471 aaKnown RBP13.79□□□□□ -0.2
SCARB2-227ENST00000640957 TRUB1Q8WWH5 349 aaKnown RBP13.79□□□□□ -0.2
SCARB2-227ENST00000640957 TP63Q9H3D4 680 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-227ENST00000640957 CDHR5Q9HBB8 845 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 MTRRQ9UBK8 725 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 PSME2Q9UL46 239 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 ARPC2O15144 300 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 ARIH2O95376 493 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 ALDOCP09972 364 aaKnown RBP13.79□□□□□ -0.2
SCARB2-227ENST00000640957 LINC00032P0C843 101 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 CYP2C8P10632 490 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 CAPN3P20807 821 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 HTR1BP28222 390 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 NDUFV1P49821 464 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 MADCAM1Q13477 382 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 MAPRE1Q15691 268 aaKnown RBP13.79□□□□□ -0.2
SCARB2-227ENST00000640957 CLEC14AQ86T13 490 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 IPMKQ8NFU5 416 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 SEPT8Q92599 483 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 HDAC11Q96DB2 347 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 ZMAT2Q96NC0 199 aaKnown RBP13.79□□□□□ -0.2
SCARB2-227ENST00000640957 ZNF670Q9BS34 389 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 RHNO1Q9BSD3 238 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 RNF38Q9H0F5 515 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 CCDC68Q9H2F9 335 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 GBA2Q9HCG7 927 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-227ENST00000640957 CMTM6Q9NX76 183 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 MAP10Q9P2G4 905 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 CNOT11Q9UKZ1 510 aaKnown RBP13.79□□□□□ -0.2
SCARB2-227ENST00000640957 CDH7Q9ULB5 785 aa13.79□□□□□ -0.2
SCARB2-227ENST00000640957 CAB39Q9Y376 341 aaPredicted RBP13.79□□□□□ -0.2
SCARB2-227ENST00000640957 CLDN25C9JDP6 229 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 CAPGP40121 348 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 MAGEA6P43360 314 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 FOXA1P55317 472 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 CREB5Q02930 508 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 GRM1Q13255 1194 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 ZC3HC1Q86WB0 502 aaKnown RBP13.78□□□□□ -0.2
SCARB2-227ENST00000640957 RDH11Q8TC12 318 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 CD300AQ9UGN4 299 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 VPS28Q9UK41 221 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 FAM95CA0A1B0GW59 222 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 ACOX3O15254 700 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 CABYRO75952 493 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 FARP2O94887 1054 aaPredicted RBP13.78□□□□□ -0.2
SCARB2-227ENST00000640957 ZNF286BP0CG31 522 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 STAG3L1P0CL83 205 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 MAP2K4P45985 399 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 TUFMP49411 452 aaKnown RBP13.78□□□□□ -0.2
SCARB2-227ENST00000640957 SULT1E1P49888 294 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 NEK2P51955 445 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 SLC12A2P55011 1212 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 COPZ1P61923 177 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 PCSK7Q16549 785 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 CATSPEREQ5SY80 951 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 BNIPLQ7Z465 357 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 GATAD2AQ86YP4 633 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 ANKFN1Q8N957 763 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 RPL3LQ92901 407 aaKnown RBP13.78□□□□□ -0.2
SCARB2-227ENST00000640957 ESAMQ96AP7 390 aa13.78□□□□□ -0.2
SCARB2-227ENST00000640957 KIF12Q96FN5 646 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms