RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 MEI4A8MW99 385 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 SLC7A4O43246 635 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 DCXO43602 365 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 GLUD1P00367 558 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 GCKP35557 465 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 CLCN5P51795 746 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 ASPHQ12797 758 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 TRMT5Q32P41 509 aaKnown RBP15.15■□□□□ 0.02
TRIM3-215ENST00000639856 PABPC1LQ4VXU2 614 aaKnown RBP15.15■□□□□ 0.02
TRIM3-215ENST00000639856 ZNF789Q5FWF6 425 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 RBM20Q5T481 1227 aaKnown RBP15.15■□□□□ 0.02
TRIM3-215ENST00000639856 GALNT7Q86SF2 657 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 SPATA6LQ8N4H0 392 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 POF1BQ8WVV4 589 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 BHMTQ93088 406 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 CLPTM1LQ96KA5 538 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 MRPL57Q9BQC6 102 aaKnown RBP15.15■□□□□ 0.02
TRIM3-215ENST00000639856 POLR1EQ9GZS1 481 aaKnown RBP15.15■□□□□ 0.02
TRIM3-215ENST00000639856 ACSS2Q9NR19 701 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 HCFC1R1Q9NWW0 138 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 SLC7A8Q9UHI5 535 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 ASB3Q9Y575 518 aa15.15■□□□□ 0.02
TRIM3-215ENST00000639856 MTCL1Q9Y4B5 1905 aaKnown RBP15.15■□□□□ 0.02
TRIM3-215ENST00000639856 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.14■□□□□ 0.01
TRIM3-215ENST00000639856 A0A1B0GVM2 712 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 LINC01553A4QN01 128 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 TCAF2A6NFQ2 919 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 E9PBE3 544 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 ZBTB14O43829 449 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 KLHL41O60662 606 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 CIB2O75838 187 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 CKMP06732 381 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 RHOCP08134 193 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 ATXN1LP0C7T5 689 aaKnown RBP15.14■□□□□ 0.01
TRIM3-215ENST00000639856 TFEBP19484 476 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 PRDX6P30041 224 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 ZNF177Q13360 481 aaPredicted RBP15.14■□□□□ 0.01
TRIM3-215ENST00000639856 ZNF235Q14590 738 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 CCDC6Q16204 474 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 C6orf163Q5TEZ5 329 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 SEL1L3Q68CR1 1132 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 CXorf57Q6NSI4 855 aaKnown RBP15.14■□□□□ 0.01
TRIM3-215ENST00000639856 CCDC149Q6ZUS6 474 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 CHST9Q7L1S5 443 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 CILP2Q8IUL8 1156 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 PHTF2Q8N3S3 785 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 MRPL43Q8N983 215 aaKnown RBP15.14■□□□□ 0.01
TRIM3-215ENST00000639856 SPPL3Q8TCT6 385 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 PDCD6IPQ8WUM4 868 aaKnown RBP15.14■□□□□ 0.01
TRIM3-215ENST00000639856 HEXDCQ8WVB3 486 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 MRPS31Q92665 395 aaKnown RBP15.14■□□□□ 0.01
TRIM3-215ENST00000639856 OR52B2Q96RD2 323 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 SEMA3CQ99985 751 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 CORO1BQ9BR76 489 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 STX18Q9P2W9 335 aaKnown RBP15.14■□□□□ 0.01
TRIM3-215ENST00000639856 STOML2Q9UJZ1 356 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 CEP290O15078 2479 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 A0A088AWK7 358 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 SLCO1B7G3V0H7 640 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 TBL1XO60907 577 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 RFPL2O75678 378 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 IRS1P35568 1242 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 CCR2P41597 374 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 CCR10P46092 362 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 OXCT1P55809 520 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 SLC25A3Q00325 362 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 TAF11Q15544 211 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 Q6ZNB5 142 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 PTAR1Q7Z6K3 402 aaPredicted RBP15.14■□□□□ 0.01
TRIM3-215ENST00000639856 LSMEM2Q8N112 164 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 STON2Q8WXE9 905 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 N4BP2L2Q92802 583 aaPredicted RBP15.14■□□□□ 0.01
TRIM3-215ENST00000639856 PANX3Q96QZ0 392 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 NDNQ99608 321 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 OLFM1Q99784 485 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 EMILIN2Q9BXX0 1053 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 SMG9Q9H0W8 520 aaKnown RBP15.14■□□□□ 0.01
TRIM3-215ENST00000639856 MFSD1Q9H3U5 465 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 VTI1BQ9UEU0 232 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 ZDHHC2Q9UIJ5 367 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 IRAK3Q9Y616 596 aa15.14■□□□□ 0.01
TRIM3-215ENST00000639856 CBX4O00257 560 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 GRID2O43424 1007 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 LDB2O43679 373 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 TBX10O75333 385 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 C1RP00736 705 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 CLCN4P51793 760 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 ACTR3P61158 418 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 PRAMEP78395 509 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 SLC34A1Q06495 639 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 KLF10Q13118 480 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 NAA25Q14CX7 972 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 FAM83EQ2M2I3 478 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 RNF219Q5W0B1 726 aaPredicted RBP15.13■□□□□ 0.01
TRIM3-215ENST00000639856 RIPOR1Q6ZS17 1223 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 LMNTD2Q8IXW0 634 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 CARNMT1Q8N4J0 409 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 HDAC10Q969S8 669 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 TSPAN17Q96FV3 270 aa15.13■□□□□ 0.01
TRIM3-215ENST00000639856 UNKQ9C0B0 810 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms