RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 CNGA3Q16281 694 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 CDKN3Q16667 212 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 ALG11Q2TAA5 492 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 USP45Q70EL2 814 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 TC2NQ8N9U0 490 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 ATL2Q8NHH9 583 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 NUS1Q96E22 293 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 WDR92Q96MX6 357 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 TSGA13Q96PP4 275 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 CLPBQ9H078 707 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 RBM22Q9NW64 420 aaKnown RBP eCLIP16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 DTLQ9NZJ0 730 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 NCKIPSDQ9NZQ3 722 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 SALL4Q9UJQ4 1053 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 DOLKQ9UPQ8 538 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 CLCA2Q9UQC9 943 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 RAI2Q9Y5P3 530 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 APC2O95996 2303 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 ACACAQ13085 2346 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 MYLKQ15746 1914 aa16.8■□□□□ 0.28
CACNA1A-259ENST00000638114 PKD1L2Q7Z442 2459 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 CPED1A4D0V7 1026 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 LMO7DNF2Z398 122 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 HEXIM1O94992 359 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 CELA2BP08218 269 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 CCNB1P14635 433 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 CTPS1P17812 591 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 KIAA1024LP59773 190 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 SRP54P61011 504 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 DSC2Q02487 901 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 SLC10A2Q12908 348 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 ARHGEF7Q14155 803 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 ODF2Q5BJF6 829 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 NYAP1Q6ZVC0 841 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 FSTL5Q8N475 847 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 IFI44Q8TCB0 444 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 GLMNQ92990 594 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 FATE1Q969F0 183 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 FUBP1Q96AE4 644 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 HDAC11Q96DB2 347 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 NXPE2Q96DL1 559 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 SCRN2Q96FV2 425 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 COQ10AQ96MF6 247 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 MAK16Q9BXY0 300 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 HYOU1Q9Y4L1 999 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 HEY1Q9Y5J3 304 aa16.79■□□□□ 0.28
CACNA1A-259ENST00000638114 LRP4O75096 1905 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 NPIPB15A6NHN6 443 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 ZNF487B1APH4 448 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 APOL1O14791 398 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 YY2O15391 372 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 SPOPO43791 374 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 OPA1O60313 960 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 MT-CO3P00414 261 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 HLA-DQB2P05538 268 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 GP1BAP07359 652 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 PDHA1P08559 390 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 ALPIP09923 528 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 KRT10P13645 584 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 LHCGRP22888 699 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 KELP23276 732 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 SLC1A1P43005 524 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 MAGEA1P43355 309 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 RPIAP49247 311 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 EPHB1P54762 984 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 PTPRRQ15256 657 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 ELOCQ15369 112 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 NR0B2Q15466 257 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 C6orf132Q5T0Z8 1188 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 LRRC38Q5VT99 294 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 ALG1LQ6GMV1 187 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 ESRP1Q6NXG1 681 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 PNCKQ6P2M8 343 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 GUSBP11Q6P575 273 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 EFL1Q7Z2Z2 1120 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 RHOT1Q8IXI2 618 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 CCDC13Q8IYE1 715 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 NDUFAF2Q8N183 169 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 PLD5Q8N7P1 536 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 OR56A4Q8NGH8 313 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 TPCN2Q8NHX9 752 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 MAPK15Q8TD08 544 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 RNF25Q96BH1 459 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 PDXPQ96GD0 296 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 MCCC1Q96RQ3 725 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 BOCQ9BWV1 1114 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 ABCG4Q9H172 646 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 WDR26Q9H7D7 661 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 DKK4Q9UBT3 224 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 AMACRQ9UHK6 382 aa16.78■□□□□ 0.28
CACNA1A-259ENST00000638114 GOLGA6CA6NDK9 693 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 GOLGA6BA6NDN3 693 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 TMEM202A6NGA9 273 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 C3orf70A6NLC5 250 aaPredicted RBP16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 TNFP01375 233 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 GOLGA6DP0CG33 693 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 CA4P22748 312 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 CES1P23141 567 aa16.77■□□□□ 0.28
CACNA1A-259ENST00000638114 ETV3P41162 512 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms