RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 RABIFP47224 123 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 LIG3P49916 1009 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 GEMIN4P57678 1058 aaKnown RBP7.89□□□□□ -1.15
PNKP-229ENST00000637897 TRAF2Q12933 501 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 ILKQ13418 452 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 DEFB133Q30KQ1 61 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 PPP6R3Q5H9R7 873 aaPredicted RBP7.89□□□□□ -1.15
PNKP-229ENST00000637897 PCSK4Q6UW60 755 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 LIPIQ6XZB0 460 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 H2AFVQ71UI9 128 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 PARGQ86W56 976 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 PSTKQ8IV42 348 aaKnown RBP7.89□□□□□ -1.15
PNKP-229ENST00000637897 SLC35F3Q8IY50 421 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 NIPA2Q8N8Q9 360 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 HCAR2Q8TDS4 363 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 TSACCQ96A04 125 aaPredicted RBP7.89□□□□□ -1.15
PNKP-229ENST00000637897 PSKH2Q96QS6 385 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 IPO11Q9UI26 975 aaKnown RBP7.89□□□□□ -1.15
PNKP-229ENST00000637897 HPCAL4Q9UM19 191 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 OR1A2Q9Y585 309 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 RAI2Q9Y5P3 530 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 SHROOM3Q8TF72 1996 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 AHCTF1Q8WYP5 2266 aa7.89□□□□□ -1.15
PNKP-229ENST00000637897 EME2A4GXA9 379 aaPredicted RBP7.88□□□□□ -1.15
PNKP-229ENST00000637897 TMEM202A6NGA9 273 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 DFFAO00273 331 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 FPGTO14772 594 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 AQP9O43315 295 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 RRP9O43818 475 aaKnown RBP7.88□□□□□ -1.15
PNKP-229ENST00000637897 FZD6O60353 706 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 BRINP1O60477 761 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 PALMO75781 387 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 MAP3K6O95382 1288 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 SOD1P00441 154 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 PRLP01236 227 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 PDHA1P08559 390 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 EIF2S3P41091 472 aaKnown RBP7.88□□□□□ -1.15
PNKP-229ENST00000637897 NAP1L1P55209 391 aaKnown RBP7.88□□□□□ -1.15
PNKP-229ENST00000637897 MAXP61244 160 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 HNRNPKP61978 463 aaKnown RBP eCLIP7.88□□□□□ -1.15
PNKP-229ENST00000637897 IL10RBQ08334 325 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 NSUN2Q08J23 767 aaKnown RBP eCLIP7.88□□□□□ -1.15
PNKP-229ENST00000637897 CCDC15Q0P6D6 951 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 SLC10A2Q12908 348 aaPredicted RBP7.88□□□□□ -1.15
PNKP-229ENST00000637897 SGCGQ13326 291 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 INPP5AQ14642 412 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 NAA30Q147X3 362 aaPredicted RBP7.88□□□□□ -1.15
PNKP-229ENST00000637897 TCEA2Q15560 299 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 CDKN3Q16667 212 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 INAVAQ3KP66 663 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 TEX35Q5T0J7 233 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 NCBP2-AS2Q69YL0 99 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 CRTC1Q6UUV9 634 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 MACC1Q6ZN28 852 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 PDZD3Q86UT5 571 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 ZNF354CQ86Y25 554 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 DCP2Q8IU60 420 aaKnown RBP7.88□□□□□ -1.15
PNKP-229ENST00000637897 PHACTR4Q8IZ21 702 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 TEX26Q8N6G2 289 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 PQLC3Q8N755 202 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 LRRN4CLQ8ND94 238 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 CCL4L1Q8NHW4 92 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 PCDH19Q8TAB3 1148 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 LMX1AQ8TE12 382 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 UBE2Q2Q8WVN8 375 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 OR1E3Q8WZA6 343 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 SPOCK2Q92563 424 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 PDXPQ96GD0 296 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 COQ10AQ96MF6 247 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 ZNF641Q96N77 438 aaPredicted RBP7.88□□□□□ -1.15
PNKP-229ENST00000637897 MGME1Q9BQP7 344 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 APOOQ9BUR5 198 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 NUP85Q9BW27 656 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 NRSN2Q9GZP1 204 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 ZWILCHQ9H900 591 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 NOD2Q9HC29 1040 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 FGF22Q9HCT0 170 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 SCUBE2Q9NQ36 999 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 MRPL40Q9NQ50 206 aaKnown RBP7.88□□□□□ -1.15
PNKP-229ENST00000637897 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.88□□□□□ -1.15
PNKP-229ENST00000637897 RNF14Q9UBS8 474 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.88□□□□□ -1.15
PNKP-229ENST00000637897 SNX12Q9UMY4 172 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 CLCA2Q9UQC9 943 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 ATP8A1Q9Y2Q0 1164 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 HYOU1Q9Y4L1 999 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 PCDHGC4Q9Y5F7 938 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 PCYT1BQ9Y5K3 369 aaPredicted RBP7.88□□□□□ -1.15
PNKP-229ENST00000637897 CSNK1G3Q9Y6M4 447 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 CAPN6Q9Y6Q1 641 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 V9GYY5 206 aaPredicted RBP7.88□□□□□ -1.15
PNKP-229ENST00000637897 UNC13CQ8NB66 2214 aa7.88□□□□□ -1.15
PNKP-229ENST00000637897 A0A1W2PQM1 296 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 ARHGAP42A6NI28 874 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 A8MX80 341 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 LMO7DNF2Z398 122 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 NEMP1O14524 444 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 TPP1O14773 563 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 MFSD11O43934 449 aa7.87□□□□□ -1.15
PNKP-229ENST00000637897 PRPSAP2O60256 369 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms