RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 TM6SF2Q9BZW4 377 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 MAGEH1Q9H213 219 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 POLR1BQ9H9Y6 1135 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 VPS18Q9P253 973 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 IP6K2Q9UHH9 426 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 SHROOM3Q8TF72 1996 aa12.75□□□□□ -0.37
CTSD-208ENST00000636843 TDRD6O60522 2096 aaKnown RBP12.75□□□□□ -0.37
CTSD-208ENST00000636843 DOCK4Q8N1I0 1966 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 GOLGA8KD6RF30 607 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 AGPSO00116 658 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 NEMP1O14524 444 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 TPP1O14773 563 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 AQP9O43315 295 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 USP12O75317 370 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 CSO75390 466 aaKnown RBP12.74□□□□□ -0.37
CTSD-208ENST00000636843 NEBLO76041 1014 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 POP4O95707 220 aaKnown RBP12.74□□□□□ -0.37
CTSD-208ENST00000636843 GSRP00390 522 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 JUNDP17535 347 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 FNTAP49354 379 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 SNRPD1P62314 119 aaKnown RBP12.74□□□□□ -0.37
CTSD-208ENST00000636843 GABREP78334 506 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 POLD3Q15054 466 aaPredicted RBP12.74□□□□□ -0.37
CTSD-208ENST00000636843 BROXQ5VW32 411 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 RWDD4Q6NW29 188 aaKnown RBP12.74□□□□□ -0.37
CTSD-208ENST00000636843 NLRP14Q86W24 1093 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 RHOT1Q8IXI2 618 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 EMC1Q8N766 993 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 PRELID2Q8N945 189 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 IFI44Q8TCB0 444 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 MAPK15Q8TD08 544 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 BTN2A2Q8WVV5 523 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 ARHGEF2Q92974 986 aaKnown RBP12.74□□□□□ -0.37
CTSD-208ENST00000636843 MAGOHBQ96A72 148 aaKnown RBP12.74□□□□□ -0.37
CTSD-208ENST00000636843 PKNOX2Q96KN3 472 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 ERP44Q9BS26 406 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 OSBPL1AQ9BXW6 950 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 CAAP1Q9H8G2 361 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 METTL5Q9NRN9 209 aaKnown RBP12.74□□□□□ -0.37
CTSD-208ENST00000636843 TMEM248Q9NWD8 314 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 PSD3Q9NYI0 1048 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 BPTFQ12830 3046 aa12.74□□□□□ -0.37
CTSD-208ENST00000636843 PRB1P04280 392 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 MPOP05164 745 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 FAM153BP0C7A2 387 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 MYF5P13349 255 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 ECHS1P30084 290 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 SDC4P31431 198 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 CETN2P41208 172 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 ABL2P42684 1182 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 UCNP55089 124 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 PFN3P60673 137 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 DMTNQ08495 405 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 PDE1CQ14123 709 aaPredicted RBP12.73□□□□□ -0.37
CTSD-208ENST00000636843 PTK2BQ14289 1009 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 MYLK3Q32MK0 819 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 FAM153CQ494X1 144 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 CFAP58Q5T655 872 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 DUPD1Q68J44 220 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 AADACL2Q6P093 401 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 DNAJC24Q6P3W2 148 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 IGF2-ASQ6U949 168 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 RYBPQ8N488 228 aaPredicted RBP12.73□□□□□ -0.37
CTSD-208ENST00000636843 TSEN2Q8NCE0 465 aaKnown RBP12.73□□□□□ -0.37
CTSD-208ENST00000636843 OR2AP1Q8NGE2 309 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 RXFP2Q8WXD0 754 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 TBATAQ96M53 351 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 IL12RB2Q99665 862 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 SH3GL2Q99962 352 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 FAM129AQ9BZQ8 928 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 LRRC19Q9H756 370 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 HOMER3Q9NSC5 361 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 FAM153AQ9UHL3 310 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 KLF15Q9UIH9 416 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 ADAM21Q9UKJ8 722 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 ACTL7AQ9Y615 435 aa12.73□□□□□ -0.37
CTSD-208ENST00000636843 TCRBV5S1A1TA0A578 114 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 EME2A4GXA9 379 aaPredicted RBP12.72□□□□□ -0.37
CTSD-208ENST00000636843 TMEM191CA6NGB0 347 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 C2CD4BA6NLJ0 364 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 SPINT1O43278 529 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 DAPK3O43293 454 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 RAMP2O60895 175 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 C1QL1O75973 258 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 GKP32189 559 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 COILP38432 576 aaPredicted RBP12.72□□□□□ -0.37
CTSD-208ENST00000636843 PTGIRP43119 386 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 PTPN9P43378 593 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 GSCP56915 257 aaPredicted RBP12.72□□□□□ -0.37
CTSD-208ENST00000636843 CXADRP78310 365 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 RAD51Q06609 339 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 EIF2B5Q13144 721 aaKnown RBP12.72□□□□□ -0.37
CTSD-208ENST00000636843 NR0B2Q15466 257 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 CDO1Q16878 200 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 ISXQ2M1V0 245 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 C15orf59Q2T9L4 293 aaPredicted RBP12.72□□□□□ -0.37
CTSD-208ENST00000636843 CCDC14Q49A88 953 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 CCDC137Q6PK04 289 aaKnown RBP12.72□□□□□ -0.37
CTSD-208ENST00000636843 STRADAQ7RTN6 431 aa12.72□□□□□ -0.37
CTSD-208ENST00000636843 CPNE8Q86YQ8 564 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms