RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.21■□□□□ 0.51
CLN6-212ENST00000636020 TAAR2Q9P1P5 351 aa18.21■□□□□ 0.51
CLN6-212ENST00000636020 MOSPD1Q9UJG1 213 aa18.21■□□□□ 0.51
CLN6-212ENST00000636020 CFAP45Q9UL16 551 aa18.21■□□□□ 0.51
CLN6-212ENST00000636020 POLHQ9Y253 713 aa18.21■□□□□ 0.51
CLN6-212ENST00000636020 RPS6KL1Q9Y6S9 549 aa18.21■□□□□ 0.51
CLN6-212ENST00000636020 PRSS38A1L453 326 aa18.2■□□□□ 0.5
CLN6-212ENST00000636020 TMCC1O94876 653 aa18.2■□□□□ 0.5
CLN6-212ENST00000636020 LDLRP01130 860 aa18.2■□□□□ 0.5
CLN6-212ENST00000636020 NDUFA8P51970 172 aa18.2■□□□□ 0.5
CLN6-212ENST00000636020 PMS2P54278 862 aa18.2■□□□□ 0.5
CLN6-212ENST00000636020 ERV3-1Q14264 604 aa18.2■□□□□ 0.5
CLN6-212ENST00000636020 UGP2Q16851 508 aa18.2■□□□□ 0.5
CLN6-212ENST00000636020 HCAR2Q8TDS4 363 aa18.2■□□□□ 0.5
CLN6-212ENST00000636020 TCTN2Q96GX1 697 aa18.2■□□□□ 0.5
CLN6-212ENST00000636020 APMAPQ9HDC9 416 aa18.2■□□□□ 0.5
CLN6-212ENST00000636020 TMEM51Q9NW97 253 aa18.2■□□□□ 0.5
CLN6-212ENST00000636020 STAP1Q9ULZ2 295 aa18.2■□□□□ 0.5
CLN6-212ENST00000636020 HPCAL4Q9UM19 191 aa18.2■□□□□ 0.5
CLN6-212ENST00000636020 AKAP9Q99996 3911 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 FAM237AA0A1B0GTK4 181 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 TSPAN11A1L157 253 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 TCP11X1B4DZS4 312 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 INSIG1O15503 277 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 SORBS2O94875 1100 aaKnown RBP18.19■□□□□ 0.5
CLN6-212ENST00000636020 RNASE9P60153 205 aaKnown RBP18.19■□□□□ 0.5
CLN6-212ENST00000636020 MRPL49Q13405 166 aaKnown RBP18.19■□□□□ 0.5
CLN6-212ENST00000636020 BIRC2Q13490 618 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 MAP7Q14244 749 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 NADK2Q4G0N4 442 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 KRBA2Q6ZNG9 492 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 ARHGAP22Q7Z5H3 698 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 PASD1Q8IV76 773 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 NAGSQ8N159 534 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 ESX1Q8N693 406 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 PRR7Q8TB68 274 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 GSDMCQ9BYG8 508 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 MAGEH1Q9H213 219 aa18.19■□□□□ 0.5
CLN6-212ENST00000636020 UBE2TQ9NPD8 197 aaPredicted RBP18.19■□□□□ 0.5
CLN6-212ENST00000636020 ERRFI1Q9UJM3 462 aaPredicted RBP18.19■□□□□ 0.5
CLN6-212ENST00000636020 TNRC6AQ8NDV7 1962 aaKnown RBP18.19■□□□□ 0.5
CLN6-212ENST00000636020 TRIM49BA6NDI0 452 aa18.18■□□□□ 0.5
CLN6-212ENST00000636020 KDELR3O43731 214 aa18.18■□□□□ 0.5
CLN6-212ENST00000636020 RECQL5O94762 991 aaPredicted RBP18.18■□□□□ 0.5
CLN6-212ENST00000636020 IGSF6O95976 241 aa18.18■□□□□ 0.5
CLN6-212ENST00000636020 F13A1P00488 732 aa18.18■□□□□ 0.5
CLN6-212ENST00000636020 ZSCAN22P10073 491 aaPredicted RBP18.18■□□□□ 0.5
CLN6-212ENST00000636020 MMP12P39900 470 aa18.18■□□□□ 0.5
CLN6-212ENST00000636020 MAPKAPK2P49137 400 aa18.18■□□□□ 0.5
CLN6-212ENST00000636020 DNM1Q05193 864 aaKnown RBP18.18■□□□□ 0.5
CLN6-212ENST00000636020 ILF3Q12906 894 aaKnown RBP eCLIP18.18■□□□□ 0.5
CLN6-212ENST00000636020 SLC25A52Q3SY17 297 aa18.18■□□□□ 0.5
CLN6-212ENST00000636020 PTPN20Q4JDL3 420 aa18.18■□□□□ 0.5
CLN6-212ENST00000636020 COBLL1Q53SF7 1204 aa18.18■□□□□ 0.5
CLN6-212ENST00000636020 TMEM135Q86UB9 458 aa18.18■□□□□ 0.5
CLN6-212ENST00000636020 NLRP14Q86W24 1093 aa18.18■□□□□ 0.5
CLN6-212ENST00000636020 NETO2Q8NC67 525 aa18.18■□□□□ 0.5
CLN6-212ENST00000636020 CARS2Q9HA77 564 aaKnown RBP18.18■□□□□ 0.5
CLN6-212ENST00000636020 DNAI1Q9UI46 699 aa18.18■□□□□ 0.5
CLN6-212ENST00000636020 PCDHGC3Q9UN70 934 aa18.18■□□□□ 0.5
CLN6-212ENST00000636020 OAS3Q9Y6K5 1087 aaKnown RBP18.18■□□□□ 0.5
CLN6-212ENST00000636020 ZNF106Q9H2Y7 1883 aaKnown RBP18.18■□□□□ 0.5
CLN6-212ENST00000636020 CFAP69A5D8W1 941 aa18.17■□□□□ 0.5
CLN6-212ENST00000636020 A8MU76 341 aa18.17■□□□□ 0.5
CLN6-212ENST00000636020 PIGNO95427 931 aa18.17■□□□□ 0.5
CLN6-212ENST00000636020 FUCA1P04066 466 aa18.17■□□□□ 0.5
CLN6-212ENST00000636020 AK4P27144 223 aaPredicted RBP18.17■□□□□ 0.5
CLN6-212ENST00000636020 GRNP28799 593 aaKnown RBP18.17■□□□□ 0.5
CLN6-212ENST00000636020 SNX16P57768 344 aa18.17■□□□□ 0.5
CLN6-212ENST00000636020 GPLD1P80108 840 aa18.17■□□□□ 0.5
CLN6-212ENST00000636020 LRRC63Q05C16 580 aa18.17■□□□□ 0.5
CLN6-212ENST00000636020 RAPGEF1Q13905 1077 aa18.17■□□□□ 0.5
CLN6-212ENST00000636020 INPP5JQ15735 1006 aaPredicted RBP18.17■□□□□ 0.5
CLN6-212ENST00000636020 ERAP2Q6P179 960 aa18.17■□□□□ 0.5
CLN6-212ENST00000636020 APLFQ8IW19 511 aaPredicted RBP18.17■□□□□ 0.5
CLN6-212ENST00000636020 C1orf131Q8NDD1 294 aaKnown RBP18.17■□□□□ 0.5
CLN6-212ENST00000636020 SUV39H2Q9H5I1 410 aa18.17■□□□□ 0.5
CLN6-212ENST00000636020 WDR26Q9H7D7 661 aa18.17■□□□□ 0.5
CLN6-212ENST00000636020 SUDS3Q9H7L9 328 aaPredicted RBP18.17■□□□□ 0.5
CLN6-212ENST00000636020 TRNAU1APQ9NX07 287 aaKnown RBP18.17■□□□□ 0.5
CLN6-212ENST00000636020 ST14Q9Y5Y6 855 aa18.17■□□□□ 0.5
CLN6-212ENST00000636020 ZSCAN5CA6NGD5 496 aaPredicted RBP18.16■□□□□ 0.5
CLN6-212ENST00000636020 BECN2A8MW95 431 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 PDE2AO00408 941 aaPredicted RBP18.16■□□□□ 0.5
CLN6-212ENST00000636020 BUB1O43683 1085 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 DLSTP36957 453 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 RHOAP61586 193 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 INO80DQ53TQ3 878 aaPredicted RBP18.16■□□□□ 0.5
CLN6-212ENST00000636020 SNAP47Q5SQN1 464 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 MANEALQ5VSG8 457 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 SLC30A9Q6PML9 568 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 BNIPLQ7Z465 357 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 ZDHHC17Q8IUH5 632 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 PELI3Q8N2H9 469 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 CASKIN2Q8WXE0 1202 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 MOCOSQ96EN8 888 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 RETREG1Q9H6L5 497 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 TMEM248Q9NWD8 314 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 CROTQ9UKG9 612 aa18.16■□□□□ 0.5
CLN6-212ENST00000636020 ATP8A1Q9Y2Q0 1164 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms