RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 CDH22Q9UJ99 828 aa12.49□□□□□ -0.41
UBASH3A-209ENST00000635325 CDYLQ9Y232 598 aa12.49□□□□□ -0.41
UBASH3A-209ENST00000635325 SPO11Q9Y5K1 396 aa12.49□□□□□ -0.41
UBASH3A-209ENST00000635325 SCAMP3O14828 347 aaKnown RBP12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 NVLO15381 856 aaKnown RBP12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 CD3EAPO15446 510 aaKnown RBP12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 STC2O76061 302 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 IPO13O94829 963 aaKnown RBP12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 CLTBP09497 229 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 IRF1P10914 325 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 PRDX6P30041 224 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 CORO1AP31146 461 aaKnown RBP12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 VHLP40337 213 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 KPNA2P52292 529 aaKnown RBP12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 HK2P52789 917 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 CLNS1AP54105 237 aaKnown RBP12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 SULT2A1Q06520 285 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 ASPHQ12797 758 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 LRRC26Q2I0M4 334 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 NXNQ6DKJ4 435 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 EP400NLQ6ZTU2 488 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 SNX32Q86XE0 403 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 GABPB2Q8TAK5 448 aaPredicted RBP12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 DNAJC9Q8WXX5 260 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 FAM136AQ96C01 138 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 PHF21BQ96EK2 531 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 ZNF599Q96NL3 588 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 PSKH2Q96QS6 385 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 RNF38Q9H0F5 515 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 ALG9Q9H6U8 611 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 GTSE1Q9NYZ3 720 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 PPM1HQ9ULR3 514 aa12.48□□□□□ -0.41
UBASH3A-209ENST00000635325 C2orf78A6NCI8 922 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 CCNT2O60583 730 aaKnown RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 TSPAN3O60637 253 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 RPP40O75818 363 aaKnown RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 NDST3O95803 873 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 GLP2RO95838 553 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 EPOP01588 193 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 ABL2P42684 1182 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 TUFMP49411 452 aaKnown RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 CDH4P55283 916 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 ACAP2Q15057 778 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 MUM1Q2TAK8 710 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 EML3Q32P44 896 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 C6orf163Q5TEZ5 329 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 KLC3Q6P597 504 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 ACAD11Q709F0 780 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 NECAB2Q7Z6G3 386 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 HPS6Q86YV9 775 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 RNF168Q8IYW5 571 aaPredicted RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 BRSK1Q8TDC3 778 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 SCG3Q8WXD2 468 aaKnown RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 IGSF21Q96ID5 467 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 CDK5RAP1Q96SZ6 601 aaKnown RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 CWH43Q9H720 699 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 TMEM39AQ9NV64 488 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 UBA2Q9UBT2 640 aaPredicted RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 SEPT3Q9UH03 358 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 ARHGAP26Q9UNA1 814 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 FIS1Q9Y3D6 152 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 BACE2Q9Y5Z0 518 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 CHD5Q8TDI0 1954 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 EIF4E1BA6NMX2 242 aaKnown RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 SLCO1B7G3V0H7 640 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 SDHDO14521 159 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 AIM2O14862 343 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 KDELR3O43731 214 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 SKAP2O75563 359 aaPredicted RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 ANPEPP15144 967 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 FDXRP22570 491 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 SP100P23497 879 aaPredicted RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 RFC2P35250 354 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 PPARGP37231 505 aaPredicted RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 SCNN1BP51168 640 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 OXCT1P55809 520 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 TBL3Q12788 808 aaKnown RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 MTA1Q13330 715 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 CCNIQ14094 377 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 BTG3Q14201 252 aaPredicted RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 TCHHL1Q5QJ38 904 aaPredicted RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 KIAA1841Q6NSI8 718 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 TMCO2Q7Z6W1 182 aaPredicted RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 ISCA2Q86U28 154 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 KBTBD2Q8IY47 623 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 CPSF7Q8N684 471 aaKnown RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 PTERQ96BW5 349 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 RTKNQ9BST9 563 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 ZBED2Q9BTP6 218 aa12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 CINPQ9BW66 212 aaPredicted RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 AGO1Q9UL18 857 aaKnown RBP12.47□□□□□ -0.41
UBASH3A-209ENST00000635325 CBX4O00257 560 aa12.46□□□□□ -0.41
UBASH3A-209ENST00000635325 UBFD1O14562 309 aaKnown RBP12.46□□□□□ -0.41
UBASH3A-209ENST00000635325 CLDN11O75508 207 aa12.46□□□□□ -0.41
UBASH3A-209ENST00000635325 RHOCP08134 193 aa12.46□□□□□ -0.41
UBASH3A-209ENST00000635325 PDHA1P08559 390 aa12.46□□□□□ -0.41
UBASH3A-209ENST00000635325 RBP1P09455 135 aa12.46□□□□□ -0.41
UBASH3A-209ENST00000635325 TSPAN8P19075 237 aa12.46□□□□□ -0.41
UBASH3A-209ENST00000635325 CR2P20023 1033 aa12.46□□□□□ -0.41
UBASH3A-209ENST00000635325 ATP6V1C1P21283 382 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms