RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 RABIFP47224 123 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 CDK18Q07002 472 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 SLC14A1Q13336 389 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 ARHGEF7Q14155 803 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 LRRC14Q15048 493 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 CNGA3Q16281 694 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 ZNF423Q2M1K9 1284 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 HLA-BQ31612 363 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 ANKRD20A2Q5SQ80 823 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 ANKRD20A1Q5TYW2 823 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 ANKRD20A3Q5VUR7 823 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 RAVER1Q8IY67 606 aaKnown RBP14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 OXR1Q8N573 874 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 TP53I13Q8NBR0 393 aaPredicted RBP14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 IFT43Q96FT9 208 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 SPATA13Q96N96 652 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 GAREM1Q9H706 876 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 GPR27Q9NS67 375 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 CA5BQ9Y2D0 317 aa14.79□□□□□ -0.04
CDC42BPB-209ENST00000634889 TMEM131Q92545 1883 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 POM121BA6NF01 834 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 USP27XA6NNY8 438 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 C4orf47A7E2U8 309 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 A8MX80 341 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 H0Y8X5 98 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 PMPCBO75439 489 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 RECQL5O94762 991 aaPredicted RBP14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 NDST3O95803 873 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 FGGP02679 453 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 ALPIP09923 528 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 THEGLP0DJG4 465 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 CTPS1P17812 591 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 STIP1P31948 543 aaKnown RBP14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 CXCR5P32302 372 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 HNF1BP35680 557 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 IGFALSP35858 605 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 TNNT3P45378 269 aaPredicted RBP14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 CLDN2P57739 230 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 PFN3P60673 137 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 SEMG2Q02383 582 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 MPP3Q13368 585 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 OASLQ15646 514 aaKnown RBP14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 PCSK7Q16549 785 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 RSPO4Q2I0M5 234 aaPredicted RBP14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 WSCD2Q2TBF2 565 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 FAM182AQ5T1J6 154 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 CRTC1Q6UUV9 634 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 KDELC1Q6UW63 502 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 CBARPQ8N350 705 aaPredicted RBP14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 SLC35F6Q8N357 371 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 OR13H1Q8NG92 308 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 ATG4AQ8WYN0 398 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 RMDN1Q96DB5 314 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 RTP4Q96DX8 246 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 PBKQ96KB5 322 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 BMFQ96LC9 184 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 COQ10AQ96MF6 247 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 SRPK1Q96SB4 655 aaKnown RBP14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 RTKNQ9BST9 563 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 TMEM121Q9BTD3 319 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 MLPHQ9BV36 600 aaPredicted RBP14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 KCND1Q9NSA2 647 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 DLL3Q9NYJ7 618 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 COQ6Q9Y2Z9 468 aa14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 AAR2Q9Y312 384 aaKnown RBP14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 PTPRZ1P23471 2315 aaPredicted RBP14.78□□□□□ -0.04
CDC42BPB-209ENST00000634889 LOC285095A0A1B0GVY8 99 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 YKT6O15498 198 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 CEP104O60308 925 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 GCATO75600 419 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 GM2AP17900 193 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 ARRB1P49407 418 aaPredicted RBP14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 GEMP55040 296 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 WNT3AP56704 352 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 YPEL5P62699 121 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 GALNT3Q14435 633 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 PRPSAP1Q14558 356 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 ACOX1Q15067 660 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 IRF4Q15306 451 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 SIX1Q15475 284 aaPredicted RBP14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 CCNG2Q16589 344 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 QPCTQ16769 361 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 LRRC66Q68CR7 880 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 CCDC70Q6NSX1 233 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 DRICH1Q6PGQ1 229 aaPredicted RBP14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 Q6ZSR6 202 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 PTAR1Q7Z6K3 402 aaPredicted RBP14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 TSPAN33Q86UF1 283 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 SPATS2Q86XZ4 545 aaKnown RBP14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 FAM71DQ8N9W8 422 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 OR2I1PQ8NGU4 316 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 CCDC110Q8TBZ0 833 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 NUS1Q96E22 293 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 OXNAD1Q96HP4 312 aaPredicted RBP14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 ELF4Q99607 663 aaPredicted RBP14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 FSD1LQ9BXM9 530 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 MAGEE1Q9HCI5 957 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 HOMER3Q9NSC5 361 aa14.77□□□□□ -0.05
CDC42BPB-209ENST00000634889 UBP1Q9NZI7 540 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms