RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 ADGRD1Q6QNK2 874 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 ZNF852Q6ZMS4 543 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 C12orf40Q86WS4 652 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 CAMK1DQ8IU85 385 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 ADHFE1Q8IWW8 467 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 UBALD2Q8IYN6 164 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 CBARPQ8N350 705 aaPredicted RBP10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 OR6P1Q8NGX9 317 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 UHMK1Q8TAS1 419 aaKnown RBP10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 FAM76AQ8TAV0 307 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 FRS2Q8WU20 508 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 SLC44A1Q8WWI5 657 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 FAM3CQ92520 227 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 TSPAN17Q96FV3 270 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 VPS39Q96JC1 886 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 MRGPRX3Q96LB0 322 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 IQCGQ9H095 443 aaKnown RBP10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 CCDC68Q9H2F9 335 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 TMEM245Q9H330 911 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 MFSD1Q9H3U5 465 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 NLE1Q9NVX2 485 aaPredicted RBP10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 CDH22Q9UJ99 828 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 ZNF711Q9Y462 761 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 NFS1Q9Y697 457 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 COMMD10Q9Y6G5 202 aa10.18□□□□□ -0.78
FOXCUT-201ENST00000628509 ANKRD36A6QL64 1941 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 C1orf232A0A0U1RR37 186 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 TSPAN11A1L157 253 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 SMIM23A6NLE4 172 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 TTC34A8MYJ7 566 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 UPK3BL1B0FP48 263 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 PRRT4C9JH25 899 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 UPK3BL2E5RIL1 263 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 H0Y858 1186 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 KPNA3O00505 521 aaPredicted RBP10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 LEFTY1O75610 366 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 SASH3O75995 380 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 VAPBO95292 243 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 MT-ND3P03897 115 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 ITGALP20701 1170 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 C5AR1P21730 350 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 CHRNA4P43681 627 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 RGRP47804 291 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 TTPAP49638 278 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 NEK3P51956 506 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 ACVR1Q04771 509 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 PTPRNQ16849 979 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 GAB4Q2WGN9 574 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 GPR33Q49SQ1 333 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 ARSIQ5FYB1 569 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 TMEM196Q5HYL7 178 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 TMEM215Q68D42 235 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 ZNF776Q68DI1 518 aaPredicted RBP10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 NEPROQ6NW34 567 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 TTC7BQ86TV6 843 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 LCA5Q86VQ0 697 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 RNF135Q8IUD6 432 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 PHTF2Q8N3S3 785 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 MAFAQ8NHW3 353 aaPredicted RBP10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 TTC8Q8TAM2 541 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 ACMSDQ8TDX5 336 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 HEXDCQ8WVB3 486 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 PIH1D2Q8WWB5 315 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 PBXIP1Q96AQ6 731 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 ULK4Q96C45 1275 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 MFSD3Q96ES6 412 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 ZNF419Q96HQ0 510 aaPredicted RBP10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 KLHL32Q96NJ5 620 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 GUCD1Q96NT3 240 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 TREX1Q9NSU2 369 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 INTS10Q9NVR2 710 aaKnown RBP10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 NKIRAS1Q9NYS0 192 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 THEGQ9P2T0 379 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 DUSP12Q9UNI6 340 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 SMG5Q9UPR3 1016 aaKnown RBP10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 SORCS3Q9UPU3 1222 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 NCKAP1Q9Y2A7 1128 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 ACTL7AQ9Y615 435 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 STON1Q9Y6Q2 735 aa10.17□□□□□ -0.78
FOXCUT-201ENST00000628509 ZCWPW2A0A1B0GU75 182 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 OTOL1A6NHN0 477 aaPredicted RBP10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 LOC730098B7Z3J9 87 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 H7C0S8 307 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 QSOX1O00391 747 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 NEMP1O14524 444 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 RNF40O75150 1001 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 BANF1O75531 89 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 ZNF821O75541 412 aaPredicted RBP10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 PIGNO95427 931 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 IL1BP01584 269 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 DNTTP04053 509 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 SHBGP04278 402 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 ACADMP11310 421 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 NMBRP28336 390 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 VIPR1P32241 457 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 ABL2P42684 1182 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 NUMBP49757 651 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 CRADDP78560 199 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 MTM1Q13496 603 aa10.16□□□□□ -0.78
FOXCUT-201ENST00000628509 CAMK2GQ13555 558 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms