RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 CHN2P52757 468 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 FKBP1BP68106 108 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 TAF10Q12962 218 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 CRTC3Q6UUV7 619 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 SCAIQ8N9R8 606 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 KLHL23Q8NBE8 558 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 SPPL2BQ8TCT7 592 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 MAML3Q96JK9 1138 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 C3orf18Q9UK00 162 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 CCNE2O96020 404 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 R3HCC1LQ7Z5L2 792 aaKnown RBP12.84□□□□□ -0.35
SCN8A-209ENST00000627620 SMYD1Q8NB12 490 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 PPIEQ9UNP9 301 aaKnown RBP12.84□□□□□ -0.35
SCN8A-209ENST00000627620 CDH13P55290 713 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 ITGA7Q13683 1181 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 DDI2Q5TDH0 399 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 LCLAT1Q6UWP7 414 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 TMC5Q6UXY8 1006 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 ALYREFQ86V81 257 aaKnown RBP12.84□□□□□ -0.35
SCN8A-209ENST00000627620 CDH19Q9H159 772 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 FANCEQ9HB96 536 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 SLCO1B3Q9NPD5 702 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 EVA1BQ9NVM1 165 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 CFAP97Q9P2B7 532 aa12.84□□□□□ -0.35
SCN8A-209ENST00000627620 ADH1CP00326 375 aa12.83□□□□□ -0.35
SCN8A-209ENST00000627620 IDO1P14902 403 aa12.83□□□□□ -0.35
SCN8A-209ENST00000627620 ADRA1BP35368 520 aa12.83□□□□□ -0.35
SCN8A-209ENST00000627620 RPL4P36578 427 aaKnown RBP12.83□□□□□ -0.35
SCN8A-209ENST00000627620 CLK3P49761 638 aaKnown RBP12.83□□□□□ -0.35
SCN8A-209ENST00000627620 SMIM11AP58511 58 aa12.83□□□□□ -0.35
SCN8A-209ENST00000627620 NOMO1Q15155 1222 aa12.83□□□□□ -0.35
SCN8A-209ENST00000627620 KCTD19Q17RG1 926 aaPredicted RBP12.83□□□□□ -0.35
SCN8A-209ENST00000627620 XYLT1Q86Y38 959 aa12.83□□□□□ -0.35
SCN8A-209ENST00000627620 C4orf32Q8N8J7 132 aa12.83□□□□□ -0.35
SCN8A-209ENST00000627620 OR10G6Q8NH81 332 aa12.83□□□□□ -0.35
SCN8A-209ENST00000627620 BTN2A3PQ96KV6 586 aa12.83□□□□□ -0.35
SCN8A-209ENST00000627620 Q96MT0 163 aa12.83□□□□□ -0.35
SCN8A-209ENST00000627620 SLC38A2Q96QD8 506 aa12.83□□□□□ -0.35
SCN8A-209ENST00000627620 CPXM1Q96SM3 734 aa12.83□□□□□ -0.35
SCN8A-209ENST00000627620 AGO3Q9H9G7 860 aaKnown RBP12.83□□□□□ -0.35
SCN8A-209ENST00000627620 SLC27A6Q9Y2P4 619 aa12.83□□□□□ -0.35
SCN8A-209ENST00000627620 RFXANKO14593 260 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 CLDN11O75508 207 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 CST1P01037 141 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 TRIM32Q13049 653 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 TAPT1Q6NXT6 567 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 PRR23CQ6ZRP0 262 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 TSHZ1Q6ZSZ6 1077 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 RNASE11Q8TAA1 199 aaKnown RBP12.83□□□□□ -0.36
SCN8A-209ENST00000627620 AGAP11Q8TF27 550 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 FNIP1Q8TF40 1166 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 ITCHQ96J02 903 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 DEFB118Q96PH6 123 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 OR52E6Q96RD3 313 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 NOL6Q9H6R4 1146 aaKnown RBP12.83□□□□□ -0.36
SCN8A-209ENST00000627620 POLR1BQ9H9Y6 1135 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 PNPOQ9NVS9 261 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 ZNF446Q9NWS9 450 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 PDE9AO76083 593 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 OR4Q2P0C623 313 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 SEMA5AQ13591 1074 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 FAM220AQ7Z4H9 259 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 DHDDSQ86SQ9 333 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 CSPG4P5Q96PW8 444 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 GINS4Q9BRT9 223 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 TBC1D30Q9Y2I9 924 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 COQ6Q9Y2Z9 468 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 SRRM3A6NNA2 597 aaPredicted RBP12.83□□□□□ -0.36
SCN8A-209ENST00000627620 SNPHO15079 494 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 PPP1R11O60927 126 aaPredicted RBP12.83□□□□□ -0.36
SCN8A-209ENST00000627620 PRG2P13727 222 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 DRD4P21917 467 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 MMP8P22894 467 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 GLUD2P49448 558 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 UBE2R2Q712K3 238 aaPredicted RBP12.83□□□□□ -0.36
SCN8A-209ENST00000627620 TOR4AQ9NXH8 423 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 RIMBP3CA6NJZ7 1639 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 RIMBP3BA6NNM3 1639 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 RIMBP3Q9UFD9 1639 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 CACNB4O00305 520 aaPredicted RBP12.83□□□□□ -0.36
SCN8A-209ENST00000627620 CILPO75339 1184 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 ENTPD5O75356 428 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 KRT36O76013 467 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 KCNJ2P63252 427 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 SULT2A1Q06520 285 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 SMARCB1Q12824 385 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 TEX44Q53QW1 395 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 PLPP4Q5VZY2 271 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 YTHDF3Q7Z739 585 aaKnown RBP12.83□□□□□ -0.36
SCN8A-209ENST00000627620 TRABD2AQ86V40 505 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 FAM124AQ86V42 546 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 ASZ1Q8WWH4 475 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 HIPK3Q9H422 1215 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 RHOJQ9H4E5 214 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 PLK2Q9NYY3 685 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 EHD3Q9NZN3 535 aa12.83□□□□□ -0.36
SCN8A-209ENST00000627620 POLR3HQ9Y535 204 aaPredicted RBP12.83□□□□□ -0.36
SCN8A-209ENST00000627620 GCATO75600 419 aa12.82□□□□□ -0.36
SCN8A-209ENST00000627620 PTDSS1P48651 473 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms