RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 CDK18Q07002 472 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 CKAP4Q07065 602 aaKnown RBP14.78□□□□□ -0.04
PNKP-221ENST00000627317 FAXCQ5TGI0 409 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 KIAA0895LQ68EN5 471 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 CCDC70Q6NSX1 233 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 KDELC1Q6UW63 502 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 KDELC2Q7Z4H8 507 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 MINDY1Q8N5J2 469 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 SNX19Q92543 992 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 FEM1CQ96JP0 617 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 DDX47Q9H0S4 455 aaKnown RBP14.78□□□□□ -0.04
PNKP-221ENST00000627317 EBF2Q9HAK2 575 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 FEZ2Q9UHY8 353 aaPredicted RBP14.78□□□□□ -0.04
PNKP-221ENST00000627317 CDC23Q9UJX2 597 aa14.78□□□□□ -0.04
PNKP-221ENST00000627317 E7EVH7 732 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 AREL1O15033 823 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 SPINT1O43278 529 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 LATO43561 262 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 TSPAN6O43657 245 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 FZD6O60353 706 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 METTL18O95568 372 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 ECEL1O95672 775 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 NDST3O95803 873 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 PDHA1P08559 390 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 ZSCAN5DPP0CG00 497 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 CTPS1P17812 591 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 FDFT1P37268 417 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 MMP12P39900 470 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 GRIA4P48058 902 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 GALNT3Q14435 633 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 KIAA1161Q6NSJ0 714 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 NEK5Q6P3R8 708 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 C4orf22Q6V702 233 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 PRUNE1Q86TP1 453 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 KLHL7Q8IXQ5 586 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 GLIS1Q8NBF1 620 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 CXorf40AQ8TE69 158 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 PIH1D2Q8WWB5 315 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 RUNDC3BQ96NL0 473 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 GORASP1Q9BQQ3 440 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 WRAP53Q9BUR4 548 aaKnown RBP14.77□□□□□ -0.05
PNKP-221ENST00000627317 MLPHQ9BV36 600 aaPredicted RBP14.77□□□□□ -0.05
PNKP-221ENST00000627317 FICDQ9BVA6 458 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 ZDHHC5Q9C0B5 715 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 MIR1-1HGQ9H1L0 117 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 TM9SF3Q9HD45 589 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 RAB6BQ9NRW1 208 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 GGT7Q9UJ14 662 aa14.77□□□□□ -0.05
PNKP-221ENST00000627317 A0A1W2PQU0 124 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 RIOK3O14730 519 aaKnown RBP14.76□□□□□ -0.05
PNKP-221ENST00000627317 GIPC1O14908 333 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 PSMD3O43242 534 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 RNGTTO60942 597 aaKnown RBP14.76□□□□□ -0.05
PNKP-221ENST00000627317 PRLP01236 227 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 SYPP08247 313 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 CYP2A6P11509 494 aaPredicted RBP14.76□□□□□ -0.05
PNKP-221ENST00000627317 CD59P13987 128 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 ITIH2P19823 946 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 MAT2AP31153 395 aaKnown RBP14.76□□□□□ -0.05
PNKP-221ENST00000627317 VIPR1P32241 457 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 RPL22P35268 128 aaKnown RBP14.76□□□□□ -0.05
PNKP-221ENST00000627317 LMAN1P49257 510 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 VPS41P49754 854 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 CCR5P51681 352 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 AFF3P51826 1226 aaKnown RBP14.76□□□□□ -0.05
PNKP-221ENST00000627317 PPP2CBP62714 309 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 RPS21P63220 83 aaKnown RBP14.76□□□□□ -0.05
PNKP-221ENST00000627317 PPP2CAP67775 309 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 SEMG2Q02383 582 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 TUBB2AQ13885 445 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 PPP1R7Q15435 360 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 TRIP13Q15645 432 aaPredicted RBP14.76□□□□□ -0.05
PNKP-221ENST00000627317 QPCTQ16769 361 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 WHAMMP3Q1A5X7 153 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 PSAPL1Q6NUJ1 521 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 DPPA4Q7L190 304 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 TRIM69Q86WT6 500 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 HORMAD1Q86X24 394 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 MRGPRX2Q96LB1 330 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 TRIB3Q96RU7 358 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 TUBB2BQ9BVA1 445 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 GTPBP2Q9BX10 602 aaKnown RBP14.76□□□□□ -0.05
PNKP-221ENST00000627317 LRRC40Q9H9A6 602 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 B4GALT6Q9UBX8 382 aa14.76□□□□□ -0.05
PNKP-221ENST00000627317 TPX2Q9ULW0 747 aaKnown RBP14.76□□□□□ -0.05
PNKP-221ENST00000627317 FRYQ5TBA9 3013 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 SPEGQ15772 3267 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 A0A0J9YYE9 177 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 A0A1W2PPC4 97 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 CAPN8A6NHC0 703 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 ESPNB1AK53 854 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 ANKRD66B4E2M5 251 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 EPOP01588 193 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 TRBC1P01850 177 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 KRT14P02533 472 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 ALPIP09923 528 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 ELFN1P0C7U0 828 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 HLA-DPA1P20036 260 aa14.75□□□□□ -0.05
PNKP-221ENST00000627317 NOVA1P51513 510 aaKnown RBP14.75□□□□□ -0.05
PNKP-221ENST00000627317 BASP1P80723 227 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms