RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 IL10RBQ08334 325 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 RFTN1Q14699 578 aaPredicted RBP6.47□□□□□ -1.37
TCF4-249ENST00000625716 SLC18A3Q16572 532 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 ZNF423Q2M1K9 1284 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 SMTNL2Q2TAL5 461 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 ODF2Q5BJF6 829 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 ATXN7L2Q5T6C5 722 aaPredicted RBP6.47□□□□□ -1.37
TCF4-249ENST00000625716 TMCO4Q5TGY1 634 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 ANKRD34AQ69YU3 496 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 TMCO3Q6UWJ1 677 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 LAYNQ6UX15 382 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 BEND4Q6ZU67 534 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 IQCHQ86VS3 1027 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 MAP7D3Q8IWC1 876 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 BBS5Q8N3I7 341 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 ARFGAP1Q8N6T3 406 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 NIPA2Q8N8Q9 360 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 KCTD6Q8NC69 237 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 ZNF564Q8TBZ8 553 aaPredicted RBP6.47□□□□□ -1.37
TCF4-249ENST00000625716 CXorf40AQ8TE69 158 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 TEKT4Q8WW24 435 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 KLK6Q92876 244 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 PMEPA1Q969W9 287 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 FAM131CQ96AQ9 280 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 KLHL32Q96NJ5 620 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 CAMK1GQ96NX5 476 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 PEBP4Q96S96 227 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 ELF4Q99607 663 aaPredicted RBP6.47□□□□□ -1.37
TCF4-249ENST00000625716 DNAJC7Q99615 494 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 ORAI3Q9BRQ5 295 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 CINPQ9BW66 212 aaPredicted RBP6.47□□□□□ -1.37
TCF4-249ENST00000625716 SLC17A9Q9BYT1 436 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 NOL6Q9H6R4 1146 aaKnown RBP6.47□□□□□ -1.37
TCF4-249ENST00000625716 LRRC19Q9H756 370 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 EBF2Q9HAK2 575 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 ABHD10Q9NUJ1 306 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.47□□□□□ -1.37
TCF4-249ENST00000625716 CWC15Q9P013 229 aaKnown RBP6.47□□□□□ -1.37
TCF4-249ENST00000625716 UVRAGQ9P2Y5 699 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 NEU3Q9UQ49 428 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 APOBEC2Q9Y235 224 aaKnown RBP6.47□□□□□ -1.37
TCF4-249ENST00000625716 FADS3Q9Y5Q0 445 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 SLCO1B1Q9Y6L6 691 aa6.47□□□□□ -1.37
TCF4-249ENST00000625716 TNRC6BQ9UPQ9 1833 aaKnown RBP6.47□□□□□ -1.37
TCF4-249ENST00000625716 CEP192Q8TEP8 1941 aa6.46□□□□□ -1.37
TCF4-249ENST00000625716 A0A1B0GTQ1 180 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 A0A1W2PR77 199 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 TMEM110-MUSTN1A8MSY1 372 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 J3KR12 359 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 FPGTO14772 594 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 PCDHGA12O60330 932 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 MFAP3LO75121 409 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 NEBLO76041 1014 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 PROSCO94903 275 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 PAK4O96013 591 aaPredicted RBP6.46□□□□□ -1.38
TCF4-249ENST00000625716 WNT1P04628 370 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 KRT7P08729 469 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 THEGLP0DJG4 465 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 PRLRP16471 622 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 PCSK2P16519 638 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 NFKBIAP25963 317 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 IL1R2P27930 398 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 PMLP29590 882 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 SERPINA4P29622 427 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 SUOXP51687 545 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 ADKP55263 362 aaKnown RBP6.46□□□□□ -1.38
TCF4-249ENST00000625716 CDH6P55285 790 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 NXPH1P58417 271 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 TAS2R38P59533 333 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 POLR2LP62875 67 aaKnown RBP6.46□□□□□ -1.38
TCF4-249ENST00000625716 BCL2L1Q07817 233 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 ELP6Q0PNE2 266 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 C19orf57Q0VDD7 668 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 ZNF235Q14590 738 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 CYTH1Q15438 398 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 DPYSL2Q16555 572 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 ZNF284Q2VY69 593 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 PRAMEF14Q5SWL7 426 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 ERAP2Q6P179 960 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 PARS2Q7L3T8 475 aaKnown RBP6.46□□□□□ -1.38
TCF4-249ENST00000625716 PTAR1Q7Z6K3 402 aaPredicted RBP6.46□□□□□ -1.38
TCF4-249ENST00000625716 SRLQ86TD4 932 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 DCP2Q8IU60 420 aaKnown RBP6.46□□□□□ -1.38
TCF4-249ENST00000625716 SHISA5Q8N114 240 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 NETO2Q8NC67 525 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 HCAR2Q8TDS4 363 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 EXOC2Q96KP1 924 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 ZNF641Q96N77 438 aaPredicted RBP6.46□□□□□ -1.38
TCF4-249ENST00000625716 ZNF599Q96NL3 588 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 MYOCQ99972 504 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 C1QTNF7Q9BXJ2 289 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 CALN1Q9BXU9 219 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 TMPRSS13Q9BYE2 586 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 CPEB1Q9BZB8 566 aaKnown RBP6.46□□□□□ -1.38
TCF4-249ENST00000625716 KLC2Q9H0B6 622 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 ATP13A3Q9H7F0 1226 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 ERVMER34-1Q9H9K5 563 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 NHEJ1Q9H9Q4 299 aaPredicted RBP6.46□□□□□ -1.38
TCF4-249ENST00000625716 FZD3Q9NPG1 666 aa6.46□□□□□ -1.38
TCF4-249ENST00000625716 HAUS2Q9NVX0 235 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms