RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 RBM22Q9NW64 420 aaKnown RBP eCLIP12.49□□□□□ -0.41
LINC00963-217ENST00000624009 SPASTQ9UBP0 616 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 B4GALT6Q9UBX8 382 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 PCDHGC4Q9Y5F7 938 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 DGKBQ9Y6T7 804 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 CELSR3Q9NYQ7 3312 aa12.49□□□□□ -0.41
LINC00963-217ENST00000624009 PDE2AO00408 941 aaPredicted RBP12.48□□□□□ -0.41
LINC00963-217ENST00000624009 TNFRSF10CO14798 259 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 MTSS1O43312 755 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 AQP9O43315 295 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 SIGLEC6O43699 453 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 RECQL5O94762 991 aaPredicted RBP12.48□□□□□ -0.41
LINC00963-217ENST00000624009 HEXIM1O94992 359 aaKnown RBP12.48□□□□□ -0.41
LINC00963-217ENST00000624009 GIMD1P0DJR0 217 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 JUNDP17535 347 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 ITIH2P19823 946 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 KELP23276 732 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 VIPR1P32241 457 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 CDKN2BP42772 138 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 NOP2P46087 812 aaKnown RBP12.48□□□□□ -0.41
LINC00963-217ENST00000624009 DUSP3P51452 185 aaPredicted RBP12.48□□□□□ -0.41
LINC00963-217ENST00000624009 COPS2P61201 443 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 E2F1Q01094 437 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 TRAF2Q12933 501 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 EIF2B5Q13144 721 aaKnown RBP12.48□□□□□ -0.41
LINC00963-217ENST00000624009 TFDP3Q5H9I0 405 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 ZCCHC8Q6NZY4 707 aaKnown RBP12.48□□□□□ -0.41
LINC00963-217ENST00000624009 LVRNQ6Q4G3 990 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 RCOR2Q8IZ40 523 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 FSTL5Q8N475 847 aaPredicted RBP12.48□□□□□ -0.41
LINC00963-217ENST00000624009 PAF1Q8N7H5 531 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 ARRDC2Q8TBH0 407 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 PIH1D2Q8WWB5 315 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 COQ10AQ96MF6 247 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 LYSMD1Q96S90 227 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 TDRD1Q9BXT4 1180 aaKnown RBP12.48□□□□□ -0.41
LINC00963-217ENST00000624009 SLC13A1Q9BZW2 595 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 NT5MQ9NPB1 228 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 MBNL1Q9NR56 388 aaKnown RBP12.48□□□□□ -0.41
LINC00963-217ENST00000624009 DKK4Q9UBT3 224 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 SALL4Q9UJQ4 1053 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 KLK13Q9UKR3 277 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 EFR3BQ9Y2G0 817 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 RAI2Q9Y5P3 530 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 PTPRQQ9UMZ3 2332 aa12.48□□□□□ -0.41
LINC00963-217ENST00000624009 A0A0J9YYE9 177 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 LMO7DNF2Z398 122 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 TRIM38O00635 465 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 PJA2O43164 708 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 NEBLO76041 1014 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 TOP3BO95985 862 aaKnown RBP12.47□□□□□ -0.41
LINC00963-217ENST00000624009 TRBC1P01850 177 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 KRT1P04264 644 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 PYGLP06737 847 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 TSHRP16473 764 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 TGM2P21980 687 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 HNF1BP35680 557 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 HK3P52790 923 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 MAXP61244 160 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 PPARDQ03181 441 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 DPTQ07507 201 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 INPP5AQ14642 412 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 ELOCQ15369 112 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 CNGA3Q16281 694 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 PPP2R5EQ16537 467 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 TPRG1LQ5T0D9 272 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 PHACTR4Q8IZ21 702 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 PNPLA1Q8N8W4 532 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 CCNYQ8ND76 341 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 EXD1Q8NHP7 514 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 RBM41Q96IZ5 413 aaKnown RBP12.47□□□□□ -0.41
LINC00963-217ENST00000624009 APOOQ9BUR5 198 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 UCKL1Q9NWZ5 548 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 APOBEC3BQ9UH17 382 aaKnown RBP12.47□□□□□ -0.41
LINC00963-217ENST00000624009 KLF15Q9UIH9 416 aa12.47□□□□□ -0.41
LINC00963-217ENST00000624009 SOWAHDA6NJG2 315 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 K7ESM1 405 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 CACNB4O00305 520 aaPredicted RBP12.46□□□□□ -0.41
LINC00963-217ENST00000624009 SDC3O75056 442 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 ZNF189O75820 626 aaPredicted RBP12.46□□□□□ -0.41
LINC00963-217ENST00000624009 ZRANB2O95218 330 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC00963-217ENST00000624009 RASGRP1O95267 797 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 HLA-DQB2P05538 268 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 ALPIP09923 528 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 GM2AP17900 193 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 ARHGEF7Q14155 803 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 PNCKQ6P2M8 343 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 MFSD7Q6UXD7 560 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 ZNF765Q7L2R6 523 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 DAAM2Q86T65 1068 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 PDCD6IPQ8WUM4 868 aaKnown RBP12.46□□□□□ -0.41
LINC00963-217ENST00000624009 GLMNQ92990 594 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 NUS1Q96E22 293 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 DTD2Q96FN9 168 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 WDR92Q96MX6 357 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 SRPK1Q96SB4 655 aaKnown RBP12.46□□□□□ -0.41
LINC00963-217ENST00000624009 VAT1Q99536 393 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 LGMNQ99538 433 aa12.46□□□□□ -0.41
LINC00963-217ENST00000624009 BAG1Q99933 345 aaPredicted RBP12.46□□□□□ -0.41
LINC00963-217ENST00000624009 BOCQ9BWV1 1114 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms