RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 GOLGA6DP0CG33 693 aa18.63■□□□□ 0.57
CIRBP-245ENST00000621399 CSNK1EP49674 416 aaKnown RBP18.63■□□□□ 0.57
CIRBP-245ENST00000621399 ACOX1Q15067 660 aa18.63■□□□□ 0.57
CIRBP-245ENST00000621399 SF3A2Q15428 464 aaKnown RBP18.63■□□□□ 0.57
CIRBP-245ENST00000621399 TEAD4Q15561 434 aa18.63■□□□□ 0.57
CIRBP-245ENST00000621399 DENND2CQ68D51 928 aa18.63■□□□□ 0.57
CIRBP-245ENST00000621399 TCEAL6Q6IPX3 200 aa18.63■□□□□ 0.57
CIRBP-245ENST00000621399 SLC23A3Q6PIS1 610 aa18.63■□□□□ 0.57
CIRBP-245ENST00000621399 CRTC1Q6UUV9 634 aa18.63■□□□□ 0.57
CIRBP-245ENST00000621399 NYAP1Q6ZVC0 841 aa18.63■□□□□ 0.57
CIRBP-245ENST00000621399 PRUNE1Q86TP1 453 aa18.63■□□□□ 0.57
CIRBP-245ENST00000621399 CREG2Q8IUH2 290 aa18.63■□□□□ 0.57
CIRBP-245ENST00000621399 C12orf50Q8NA57 414 aaPredicted RBP18.63■□□□□ 0.57
CIRBP-245ENST00000621399 TCEAL3Q969E4 200 aa18.63■□□□□ 0.57
CIRBP-245ENST00000621399 MRGPRX2Q96LB1 330 aa18.63■□□□□ 0.57
CIRBP-245ENST00000621399 C16orf45Q96MC5 204 aaPredicted RBP18.63■□□□□ 0.57
CIRBP-245ENST00000621399 NUSAP1Q9BXS6 441 aaKnown RBP18.63■□□□□ 0.57
CIRBP-245ENST00000621399 GOLGA6AQ9NYA3 693 aa18.63■□□□□ 0.57
CIRBP-245ENST00000621399 COQ6Q9Y2Z9 468 aa18.63■□□□□ 0.57
CIRBP-245ENST00000621399 OTOGLQ3ZCN5 2332 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 GOLGA8CPA6NN73 597 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 ETS1P14921 441 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 LHCGRP22888 699 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 CD38P28907 300 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 LMNB2Q03252 620 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 CNGA3Q16281 694 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 FAXCQ5TGI0 409 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 TSPAN33Q86UF1 283 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 SLC25A41Q8N5S1 370 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 GPR161Q8N6U8 529 aaKnown RBP18.62■□□□□ 0.57
CIRBP-245ENST00000621399 ATL2Q8NHH9 583 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 SKA1Q96BD8 255 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 LRRC45Q96CN5 670 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 LENG8Q96PV6 779 aaPredicted RBP18.62■□□□□ 0.57
CIRBP-245ENST00000621399 FICDQ9BVA6 458 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 CA5BQ9Y2D0 317 aa18.62■□□□□ 0.57
CIRBP-245ENST00000621399 GON4LQ3T8J9 2241 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 A0A0U1RQS6 177 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 FPGTO14772 594 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 RAD51BO15315 384 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 PHF2O75151 1096 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 RECQL5O94762 991 aaPredicted RBP18.61■□□□□ 0.57
CIRBP-245ENST00000621399 AGTP01019 485 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 ATXN1LP0C7T5 689 aaKnown RBP18.61■□□□□ 0.57
CIRBP-245ENST00000621399 ZSCAN5DPP0CG00 497 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 TGM1P22735 817 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 COILP38432 576 aaPredicted RBP18.61■□□□□ 0.57
CIRBP-245ENST00000621399 PAFAH1B1P43034 410 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 C21orf59P57076 290 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 CLDN2P57739 230 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 IRX4P78413 519 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 SLC1A5Q15758 541 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 CYP1B1Q16678 543 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 SIRPB2Q5JXA9 342 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 LRRC66Q68CR7 880 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 TTC27Q6P3X3 843 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 LAYNQ6UX15 382 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 GLIS1Q8NBF1 620 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 TMEM145Q8NBT3 493 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 LYSMD1Q96S90 227 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 KLF6Q99612 283 aaPredicted RBP18.61■□□□□ 0.57
CIRBP-245ENST00000621399 CAPN10Q9HC96 672 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 FSCN3Q9NQT6 498 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 PAK5Q9P286 719 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 RNF14Q9UBS8 474 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 HS3ST3A1Q9Y663 406 aa18.61■□□□□ 0.57
CIRBP-245ENST00000621399 EP300Q09472 2414 aaPredicted RBP18.61■□□□□ 0.57
CIRBP-245ENST00000621399 C1orf232A0A0U1RR37 186 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 A0A1B0GVT2 93 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 A0A1W2PR77 199 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 PSMD11O00231 422 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 VILLO15195 856 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 PSMD3O43242 534 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 FOXD2O60548 495 aaPredicted RBP18.6■□□□□ 0.57
CIRBP-245ENST00000621399 CLDN7O95471 211 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 PIRTP0C851 137 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 ZNF30P17039 623 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 HLA-DPA1P20036 260 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 RPL22P35268 128 aaKnown RBP18.6■□□□□ 0.57
CIRBP-245ENST00000621399 FDFT1P37268 417 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 CHRNA4P43681 627 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 SPARCL1Q14515 664 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 LRRC14Q15048 493 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 CCDC137Q6PK04 289 aaKnown RBP18.6■□□□□ 0.57
CIRBP-245ENST00000621399 PRR23CQ6ZRP0 262 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 HSD11B1LQ7Z5J1 315 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 CBARPQ8N350 705 aaPredicted RBP18.6■□□□□ 0.57
CIRBP-245ENST00000621399 MFSD2AQ8NA29 543 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 DENND6BQ8NEG7 585 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 CENPTQ96BT3 561 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 COQ10AQ96MF6 247 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 SRPK1Q96SB4 655 aaKnown RBP18.6■□□□□ 0.57
CIRBP-245ENST00000621399 APOL2Q9BQE5 337 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 ETNK1Q9HBU6 452 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 MAGEE1Q9HCI5 957 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 RAB6BQ9NRW1 208 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 ANKRD36A6QL64 1941 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 CEP192Q8TEP8 1941 aa18.6■□□□□ 0.57
CIRBP-245ENST00000621399 E7EVH7 732 aa18.59■□□□□ 0.57
CIRBP-245ENST00000621399 H0Y8X5 98 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms