RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 ERVPABLB-1P60509 514 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 SPIDRQ14159 915 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 C3orf38Q5JPI3 329 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 NYAP1Q6ZVC0 841 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 PGBD5Q8N414 524 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 KYQ8NBH2 561 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 SPOCK2Q92563 424 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 PDXPQ96GD0 296 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 RBM15Q96T37 977 aaKnown RBP eCLIP24.08■■□□□ 1.45
ATXN3-253ENST00000621269 MGME1Q9BQP7 344 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 WDR26Q9H7D7 661 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 NOD2Q9HC29 1040 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 THSD1Q9NS62 852 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 IFNKQ9P0W0 207 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 ENTPD2Q9Y5L3 495 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 RAI2Q9Y5P3 530 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 KNTC1P50748 2209 aa24.08■■□□□ 1.45
ATXN3-253ENST00000621269 TMEM202A6NGA9 273 aa24.07■■□□□ 1.44
ATXN3-253ENST00000621269 PDE2AO00408 941 aaPredicted RBP24.07■■□□□ 1.44
ATXN3-253ENST00000621269 HOXC4P09017 264 aaPredicted RBP24.07■■□□□ 1.44
ATXN3-253ENST00000621269 CR2P20023 1033 aa24.07■■□□□ 1.44
ATXN3-253ENST00000621269 RBMS1P29558 406 aaKnown RBP24.07■■□□□ 1.44
ATXN3-253ENST00000621269 RALGPS1Q5JS13 557 aa24.07■■□□□ 1.44
ATXN3-253ENST00000621269 PNCKQ6P2M8 343 aa24.07■■□□□ 1.44
ATXN3-253ENST00000621269 OR1E3Q8WZA6 343 aa24.07■■□□□ 1.44
ATXN3-253ENST00000621269 NAF1Q96HR8 494 aaKnown RBP24.07■■□□□ 1.44
ATXN3-253ENST00000621269 PRORYQ9H606 182 aa24.07■■□□□ 1.44
ATXN3-253ENST00000621269 KCTD5Q9NXV2 234 aa24.07■■□□□ 1.44
ATXN3-253ENST00000621269 RCOR3Q9P2K3 495 aaPredicted RBP24.07■■□□□ 1.44
ATXN3-253ENST00000621269 PHTF1Q9UMS5 762 aa24.07■■□□□ 1.44
ATXN3-253ENST00000621269 CACNA1GO43497 2377 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 TNFRSF10CO14798 259 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 CYP2A6P11509 494 aaPredicted RBP24.06■■□□□ 1.44
ATXN3-253ENST00000621269 GM2AP17900 193 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 VIPR1P32241 457 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 TRIM23P36406 574 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 MAXP61244 160 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 DENND2CQ68D51 928 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 TAF8Q7Z7C8 310 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 LRRC49Q8IUZ0 686 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 SPACA3Q8IXA5 215 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 OR6C4Q8NGE1 309 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 CCDC74AQ96AQ1 378 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 NUS1Q96E22 293 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 HIC2Q96JB3 615 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 COQ10AQ96MF6 247 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 FCRL3Q96P31 734 aaPredicted RBP24.06■■□□□ 1.44
ATXN3-253ENST00000621269 UBL7Q96S82 380 aaPredicted RBP24.06■■□□□ 1.44
ATXN3-253ENST00000621269 FGF22Q9HCT0 170 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 MOSPD1Q9UJG1 213 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 LRRK1Q38SD2 2015 aa24.06■■□□□ 1.44
ATXN3-253ENST00000621269 GYPCP04921 128 aa24.05■■□□□ 1.44
ATXN3-253ENST00000621269 TPM3P06753 285 aa24.05■■□□□ 1.44
ATXN3-253ENST00000621269 CASP14P31944 242 aa24.05■■□□□ 1.44
ATXN3-253ENST00000621269 TLE3Q04726 772 aa24.05■■□□□ 1.44
ATXN3-253ENST00000621269 KCTD16Q68DU8 428 aa24.05■■□□□ 1.44
ATXN3-253ENST00000621269 FOXR1Q6PIV2 292 aa24.05■■□□□ 1.44
ATXN3-253ENST00000621269 FAM46DQ8NEK8 389 aa24.05■■□□□ 1.44
ATXN3-253ENST00000621269 ZNF564Q8TBZ8 553 aaPredicted RBP24.05■■□□□ 1.44
ATXN3-253ENST00000621269 MRPL40Q9NQ50 206 aaKnown RBP24.05■■□□□ 1.44
ATXN3-253ENST00000621269 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.05■■□□□ 1.44
ATXN3-253ENST00000621269 HEXIM1O94992 359 aaKnown RBP24.04■■□□□ 1.44
ATXN3-253ENST00000621269 IL4RP24394 825 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 GJC1P36383 396 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 ITKQ08881 620 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 TRAF2Q12933 501 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 MMRN1Q13201 1228 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 CNGA3Q16281 694 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 TSR1Q2NL82 804 aaKnown RBP24.04■■□□□ 1.44
ATXN3-253ENST00000621269 ARMC12Q5T9G4 340 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 BROXQ5VW32 411 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 IGF2-ASQ6U949 168 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 KCTD6Q8NC69 237 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 WDR36Q8NI36 951 aaKnown RBP24.04■■□□□ 1.44
ATXN3-253ENST00000621269 BBC3Q96PG8 261 aaPredicted RBP24.04■■□□□ 1.44
ATXN3-253ENST00000621269 GFM1Q96RP9 751 aaKnown RBP24.04■■□□□ 1.44
ATXN3-253ENST00000621269 LGR4Q9BXB1 951 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 CYP4F12Q9HCS2 524 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 NT5MQ9NPB1 228 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 ASCL3Q9NQ33 180 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 PHPT1Q9NRX4 125 aaPredicted RBP24.04■■□□□ 1.44
ATXN3-253ENST00000621269 CTTNBP2NLQ9P2B4 639 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 PCDHGA8Q9Y5G5 932 aa24.04■■□□□ 1.44
ATXN3-253ENST00000621269 NTN3O00634 580 aaPredicted RBP24.03■■□□□ 1.44
ATXN3-253ENST00000621269 CASC3O15234 703 aaKnown RBP24.03■■□□□ 1.44
ATXN3-253ENST00000621269 CD48P09326 243 aa24.03■■□□□ 1.44
ATXN3-253ENST00000621269 KRT10P13645 584 aa24.03■■□□□ 1.44
ATXN3-253ENST00000621269 PTMSP20962 102 aa24.03■■□□□ 1.44
ATXN3-253ENST00000621269 ARHGEF7Q14155 803 aa24.03■■□□□ 1.44
ATXN3-253ENST00000621269 NDUFAF2Q8N183 169 aa24.03■■□□□ 1.44
ATXN3-253ENST00000621269 ARL14Q8N4G2 192 aa24.03■■□□□ 1.44
ATXN3-253ENST00000621269 FAM71BQ8TC56 605 aa24.03■■□□□ 1.44
ATXN3-253ENST00000621269 KCNE4Q8WWG9 221 aa24.03■■□□□ 1.44
ATXN3-253ENST00000621269 SCRN2Q96FV2 425 aa24.03■■□□□ 1.44
ATXN3-253ENST00000621269 SLC46A1Q96NT5 459 aa24.03■■□□□ 1.44
ATXN3-253ENST00000621269 TMEM168Q9H0V1 697 aa24.03■■□□□ 1.44
ATXN3-253ENST00000621269 ANKRD36A6QL64 1941 aa24.03■■□□□ 1.44
ATXN3-253ENST00000621269 PGLSO95336 258 aa24.02■■□□□ 1.44
ATXN3-253ENST00000621269 MYCLP1P12525 358 aaPredicted RBP24.02■■□□□ 1.44
ATXN3-253ENST00000621269 ETV3P41162 512 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms