RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 OR52K1Q8NGK4 314 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 RAB2BQ8WUD1 216 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 INTS10Q9NVR2 710 aaKnown RBP5.05□□□□□ -1.6
VPS13D-214ENST00000620676 EIF3LQ9Y262 564 aaKnown RBP5.05□□□□□ -1.6
VPS13D-214ENST00000620676 ZHX2Q9Y6X8 837 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 NPHP4O75161 1426 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-214ENST00000620676 MSH4O15457 936 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 CD48P09326 243 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 PIK3CGP48736 1102 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 GDF10P55107 478 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 PPP3CAQ08209 521 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 FAM131BQ86XD5 332 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 GLIS1Q8NBF1 620 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 CENPNQ96H22 339 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-214ENST00000620676 PRKAG2Q9UGJ0 569 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 CLCA3PQ9Y6N3 262 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 NCANO14594 1321 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF705EA8MWA4 302 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-214ENST00000620676 TCEA3O75764 348 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 DNTTP04053 509 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 PTGER2P43116 358 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 BAG6P46379 1132 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 NFE2L1Q14494 772 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 PDPRQ8NCN5 879 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 PJA1Q8NG27 643 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 ATG10Q9H0Y0 220 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 KANSL1LA0AUZ9 987 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 SEC22BO75396 215 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 CYP2F1P24903 491 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 PCSK6P29122 969 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 NUP62P37198 522 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-214ENST00000620676 CYP24A1Q07973 514 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 LZTR1Q8N653 840 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 ZFP90Q8TF47 636 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 Q96MT0 163 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 ZFP14Q9HCL3 533 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF69Q9UC07 566 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 DNMT1P26358 1616 aaKnown RBP5.05□□□□□ -1.6
VPS13D-214ENST00000620676 FXYD6-FXYD2A0A087WZ82 144 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 TK2O00142 265 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 PQBP1O60828 265 aaKnown RBP5.05□□□□□ -1.6
VPS13D-214ENST00000620676 PABPC4LP0CB38 370 aaKnown RBP5.05□□□□□ -1.6
VPS13D-214ENST00000620676 TFEBP19484 476 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 GLDCP23378 1020 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 GSTM4Q03013 218 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 CTBP1Q13363 440 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 NR6A1Q15406 480 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 LSM12Q3MHD2 195 aaKnown RBP5.05□□□□□ -1.6
VPS13D-214ENST00000620676 RRM2BQ7LG56 351 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 LGI2Q8N0V4 545 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 COLGALT1Q8NBJ5 622 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 ANKRD49Q8WVL7 239 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 SLC44A1Q8WWI5 657 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 GTF2H4Q92759 462 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 FXYD6Q9H0Q3 95 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 DBNDD1Q9H9R9 158 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 FAM86C1Q9NVL1 165 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 CDC40O60508 579 aaKnown RBP eCLIP5.05□□□□□ -1.6
VPS13D-214ENST00000620676 SERPINA1P01009 418 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 RAPSNQ13702 412 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 HECTD3Q5T447 861 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 TIGD7Q6NT04 549 aaPredicted RBP5.05□□□□□ -1.6
VPS13D-214ENST00000620676 HS6ST3Q8IZP7 471 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 CNIH3Q8TBE1 160 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 GAB3Q8WWW8 586 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 ACTR3BQ9P1U1 418 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 ZNHIT2Q9UHR6 403 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 PCDHGB4Q9UN71 923 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 PCDHGB5Q9Y5G0 923 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 TTC37Q6PGP7 1564 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 YES1P07947 543 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 HGFP14210 728 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 TCF3P15923 654 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 NUDT6P53370 316 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 MERTKQ12866 999 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 SMCO1Q147U7 214 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 OVOS1Q6IE37 1185 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 PLET1Q6UQ28 207 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 ZNF341Q9BYN7 854 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 INIPQ9NRY2 104 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 TBC1D13Q9NVG8 400 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 PADI4Q9UM07 663 aa5.05□□□□□ -1.6
VPS13D-214ENST00000620676 GRIK1P39086 918 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 RABGGTBP53611 331 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 HSPA2P54652 639 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 MTPNP58546 118 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TNK2Q07912 1038 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TIGD6Q17RP2 521 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 ANKRD26P1Q6NSI1 321 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 CATSPER4Q7RTX7 472 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 KCNMB4Q86W47 210 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 SLC15A3Q8IY34 581 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TARS2Q9BW92 718 aaKnown RBP5.04□□□□□ -1.6
VPS13D-214ENST00000620676 LHPPQ9H008 270 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 GDAP2Q9NXN4 497 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 STXBP5LQ9Y2K9 1186 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 PTGDR2Q9Y5Y4 395 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 ABHD2P08910 425 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 SLC12A3P55017 1021 aa5.04□□□□□ -1.6
VPS13D-214ENST00000620676 TAP1Q03518 808 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms