RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 GIMAP2Q9UG22 337 aa11.84□□□□□ -0.51
C11orf54-215ENST00000617482 C9JVG2 144 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 TNFRSF10BO14763 440 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 S1PR4O95977 384 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 CD52P31358 61 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 PSMD8P48556 350 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 SLC7A2P52569 658 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 TSPY1Q01534 308 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 IKBKEQ14164 716 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 GNASQ5JWF2 1037 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 ZNF678Q5SXM1 525 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 SLC22A9Q8IVM8 553 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 THEM5Q8N1Q8 247 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 SCML4Q8N228 414 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 FAM110BQ8TC76 370 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 RSPH1Q8WYR4 309 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 PSMG2Q969U7 264 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 PTERQ96BW5 349 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 HIC2Q96JB3 615 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 SLC25A23Q9BV35 468 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 ARNT2Q9HBZ2 717 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 MRPL40Q9NQ50 206 aaKnown RBP11.83□□□□□ -0.52
C11orf54-215ENST00000617482 CD300AQ9UGN4 299 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 CROTQ9UKG9 612 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 RNF11Q9Y3C5 154 aa11.83□□□□□ -0.52
C11orf54-215ENST00000617482 ARHGEF37A1IGU5 675 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 LRRC14BA6NHZ5 514 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 ZNF839A8K0R7 811 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 SIX3O95343 332 aaPredicted RBP11.82□□□□□ -0.52
C11orf54-215ENST00000617482 CYP11A1P05108 521 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 MMP2P08253 660 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 ALDOCP09972 364 aaKnown RBP11.82□□□□□ -0.52
C11orf54-215ENST00000617482 RPS6KA3P51812 740 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 SH3BP2P78314 561 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 LAMB3Q13751 1172 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 GEN1Q17RS7 908 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 KIF19Q2TAC6 998 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 ALFQ53S48 1182 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 SIRPB2Q5JXA9 342 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 LARP4Q71RC2 724 aaKnown RBP eCLIP11.82□□□□□ -0.52
C11orf54-215ENST00000617482 FUNDC1Q8IVP5 155 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 GRIN3AQ8TCU5 1115 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 C19orf60Q96EN9 201 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 SLC2A11Q9BYW1 496 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 SENP6Q9GZR1 1112 aaPredicted RBP11.82□□□□□ -0.52
C11orf54-215ENST00000617482 AKTIPQ9H8T0 292 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 RGS18Q9NS28 235 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 ABI2Q9NYB9 513 aaPredicted RBP11.82□□□□□ -0.52
C11orf54-215ENST00000617482 TMEM181Q9P2C4 612 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 SARDHQ9UL12 918 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 PADI3Q9ULW8 664 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 MYLKQ15746 1914 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 ANKRD33BA6NCL7 494 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 H3BSA7 217 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 TIPRLO75663 272 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 CKMT2P17540 419 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 HTR7P34969 479 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 GRIA3P42263 894 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 GPR15P49685 360 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 INHBCP55103 352 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 DDR2Q16832 855 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 SLC39A12Q504Y0 691 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 UNC50Q53HI1 259 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 C6orf10Q5SRN2 563 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 SPRYD7Q5W111 196 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 HMBOX1Q6NT76 420 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 B3GNT6Q6ZMB0 384 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 BEND5Q7L4P6 421 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 DHFR2Q86XF0 187 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 TBATAQ96M53 351 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 RANBP9Q96S59 729 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 TMEM79Q9BSE2 394 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 SP110Q9HB58 689 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 ATP13A1Q9HD20 1204 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 PLK2Q9NYY3 685 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 UXTQ9UBK9 157 aaPredicted RBP11.82□□□□□ -0.52
C11orf54-215ENST00000617482 DSEQ9UL01 958 aa11.82□□□□□ -0.52
C11orf54-215ENST00000617482 TCRBV3S1A0A5B6 114 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 NR5A2O00482 541 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 COQ9O75208 318 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 SRP72O76094 671 aaKnown RBP11.81□□□□□ -0.52
C11orf54-215ENST00000617482 PIRTP0C851 137 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 SLC7A1P30825 629 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 TRAP1Q12931 704 aaKnown RBP11.81□□□□□ -0.52
C11orf54-215ENST00000617482 APOFQ13790 326 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 SLC14A2Q15849 920 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 MAP7D1Q3KQU3 841 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 VPS26BQ4G0F5 336 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 SAMD4BQ5PRF9 694 aaKnown RBP11.81□□□□□ -0.52
C11orf54-215ENST00000617482 RETREG3Q86VR2 466 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 LRRC49Q8IUZ0 686 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 GABPB2Q8TAK5 448 aaPredicted RBP11.81□□□□□ -0.52
C11orf54-215ENST00000617482 GPR152Q8TDT2 470 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 CANT1Q8WVQ1 401 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 ZNF597Q96LX8 424 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 ZNF512Q96ME7 567 aaPredicted RBP11.81□□□□□ -0.52
C11orf54-215ENST00000617482 RBM38Q9H0Z9 239 aaKnown RBP11.81□□□□□ -0.52
C11orf54-215ENST00000617482 CAAP1Q9H8G2 361 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 PTTG2Q9NZH5 202 aa11.81□□□□□ -0.52
C11orf54-215ENST00000617482 CNOT11Q9UKZ1 510 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms