RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 FETUBQ9UGM5 382 aa15.21■□□□□ 0.03
CBWD1-225ENST00000616944 A0A0U1RQS6 177 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 CCDC78A2IDD5 438 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 FAM159BA6NKW6 160 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 C16orf96A6NNT2 1141 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 UPK3BL1B0FP48 263 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 UPK3BL2E5RIL1 263 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 KPNA3O00505 521 aaPredicted RBP15.21■□□□□ 0.02
CBWD1-225ENST00000616944 CRTAMO95727 393 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 TIMP2P16035 220 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 COL9A1P20849 921 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 GCAP28676 217 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 HMGCLP35914 325 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 ABL2P42684 1182 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 NUMA1Q14980 2115 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 EFTUD2Q15029 972 aaKnown RBP eCLIP15.21■□□□□ 0.02
CBWD1-225ENST00000616944 CNGA3Q16281 694 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 KBTBD12Q3ZCT8 623 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 USP45Q70EL2 814 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 LYSMD3Q7Z3D4 306 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 MMAAQ8IVH4 418 aaKnown RBP15.21■□□□□ 0.02
CBWD1-225ENST00000616944 UBALD2Q8IYN6 164 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 RPLP0P6Q8NHW5 317 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 STYXQ8WUJ0 223 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 SRPK1Q96SB4 655 aaKnown RBP15.21■□□□□ 0.02
CBWD1-225ENST00000616944 C19orf43Q9BQ61 176 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 DOCK9Q9BZ29 2069 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 CD320Q9NPF0 282 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 EURLQ9NYK6 297 aa15.21■□□□□ 0.02
CBWD1-225ENST00000616944 NDRG2Q9UN36 371 aaKnown RBP15.21■□□□□ 0.02
CBWD1-225ENST00000616944 SPINT1O43278 529 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 PIAS1O75925 651 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 IL1BP01584 269 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 HOXB2P14652 356 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 LHCGRP22888 699 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 TARSP26639 723 aaKnown RBP15.2■□□□□ 0.02
CBWD1-225ENST00000616944 ARSDP51689 593 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 PDE1BQ01064 536 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 SATB1Q01826 763 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 FZD5Q13467 585 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 PTPRCAPQ14761 206 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 POM121L1PQ3SYA9 428 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 LRRC73Q5JTD7 316 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 CRTC1Q6UUV9 634 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 TSPAN33Q86UF1 283 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 OR13C4Q8NGS5 318 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 OR2T3Q8NH03 318 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 DNAJC1Q96KC8 554 aaKnown RBP15.2■□□□□ 0.02
CBWD1-225ENST00000616944 CYTH2Q99418 400 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 DHRS4Q9BTZ2 278 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 MKRN2Q9H000 416 aaKnown RBP15.2■□□□□ 0.02
CBWD1-225ENST00000616944 FBRSQ9HAH7 460 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 NLE1Q9NVX2 485 aaPredicted RBP15.2■□□□□ 0.02
CBWD1-225ENST00000616944 IL1RAPL1Q9NZN1 696 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 IL17CQ9P0M4 197 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 MMP17Q9ULZ9 603 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 TRPM6Q9BX84 2022 aa15.2■□□□□ 0.02
CBWD1-225ENST00000616944 C1orf232A0A0U1RR37 186 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 EXOC1LA0A1B0GW35 172 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 CXorf49A8MYA2 514 aaPredicted RBP15.19■□□□□ 0.02
CBWD1-225ENST00000616944 C1QTNF3-AMACRE9PGA6 284 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 BUD23O43709 281 aaKnown RBP15.19■□□□□ 0.02
CBWD1-225ENST00000616944 SYNCRIPO60506 623 aaKnown RBP15.19■□□□□ 0.02
CBWD1-225ENST00000616944 LPOP22079 712 aaPredicted RBP15.19■□□□□ 0.02
CBWD1-225ENST00000616944 DRD3P35462 400 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 MMP12P39900 470 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 STARD3Q14849 445 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 CST6Q15828 149 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 LONRF1Q17RB8 773 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 KLHL38Q2WGJ6 581 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 SDE2Q6IQ49 451 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 NDUFAF2Q8N183 169 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 EPS8L3Q8TE67 593 aaKnown RBP15.19■□□□□ 0.02
CBWD1-225ENST00000616944 ERLEC1Q96DZ1 483 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 PPP1R16AQ96I34 528 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 SH3GL2Q99962 352 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 HDAC8Q9BY41 377 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 ROPN1BQ9BZX4 212 aaPredicted RBP15.19■□□□□ 0.02
CBWD1-225ENST00000616944 ROPN1Q9HAT0 212 aaPredicted RBP15.19■□□□□ 0.02
CBWD1-225ENST00000616944 ZFYVE1Q9HBF4 777 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 LTB4R2Q9NPC1 389 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 PCDH12Q9NPG4 1184 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 POLR3BQ9NW08 1133 aaPredicted RBP15.19■□□□□ 0.02
CBWD1-225ENST00000616944 VPS18Q9P253 973 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 B4GALT6Q9UBX8 382 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 GGT7Q9UJ14 662 aa15.19■□□□□ 0.02
CBWD1-225ENST00000616944 MTF2Q9Y483 593 aaPredicted RBP15.19■□□□□ 0.02
CBWD1-225ENST00000616944 C2orf81A6NN90 581 aa15.18■□□□□ 0.02
CBWD1-225ENST00000616944 H7C0S8 307 aa15.18■□□□□ 0.02
CBWD1-225ENST00000616944 AREL1O15033 823 aa15.18■□□□□ 0.02
CBWD1-225ENST00000616944 VAPBO95292 243 aa15.18■□□□□ 0.02
CBWD1-225ENST00000616944 CLDN7O95471 211 aa15.18■□□□□ 0.02
CBWD1-225ENST00000616944 ERVK-10P10266 1014 aa15.18■□□□□ 0.02
CBWD1-225ENST00000616944 PAMP19021 973 aa15.18■□□□□ 0.02
CBWD1-225ENST00000616944 PSMD8P48556 350 aa15.18■□□□□ 0.02
CBWD1-225ENST00000616944 MGAT5Q09328 741 aa15.18■□□□□ 0.02
CBWD1-225ENST00000616944 IFFO1Q0D2I5 559 aa15.18■□□□□ 0.02
CBWD1-225ENST00000616944 RALGDSQ12967 914 aa15.18■□□□□ 0.02
CBWD1-225ENST00000616944 RASA2Q15283 850 aa15.18■□□□□ 0.02
CBWD1-225ENST00000616944 SKIDA1Q1XH10 827 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms