RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 NAP1L3Q99457 506 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 PLEKHB1Q9UF11 243 aaPredicted RBP17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 VANGL2Q9ULK5 521 aa17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 DOLKQ9UPQ8 538 aa17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 WASF2Q9Y6W5 498 aa17.77■□□□□ 0.44
TRAPPC3-209ENST00000616395 MYO1FO00160 1098 aa17.76■□□□□ 0.43
TRAPPC3-209ENST00000616395 TUBBP07437 444 aa17.76■□□□□ 0.43
TRAPPC3-209ENST00000616395 CDH5P33151 784 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC3-209ENST00000616395 GGCXP38435 758 aa17.76■□□□□ 0.43
TRAPPC3-209ENST00000616395 ZFP36L1Q07352 338 aaKnown RBP17.76■□□□□ 0.43
TRAPPC3-209ENST00000616395 TCEA2Q15560 299 aa17.76■□□□□ 0.43
TRAPPC3-209ENST00000616395 SLFN11Q7Z7L1 901 aa17.76■□□□□ 0.43
TRAPPC3-209ENST00000616395 TMEM159Q96B96 161 aa17.76■□□□□ 0.43
TRAPPC3-209ENST00000616395 OSBPL9Q96SU4 736 aa17.76■□□□□ 0.43
TRAPPC3-209ENST00000616395 TRIM62Q9BVG3 475 aa17.76■□□□□ 0.43
TRAPPC3-209ENST00000616395 ZNF71Q9NQZ8 489 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC3-209ENST00000616395 TBC1D30Q9Y2I9 924 aa17.76■□□□□ 0.43
TRAPPC3-209ENST00000616395 TRPM6Q9BX84 2022 aa17.76■□□□□ 0.43
TRAPPC3-209ENST00000616395 SYNJ2BP-COX16A0A087WUM0 186 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 AP1G1O43747 822 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 SPOPO43791 374 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 FTCDO95954 541 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 ITGB7P26010 798 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 L1CAMP32004 1257 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 CETN2P41208 172 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 RECQLP46063 649 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 CCR10P46092 362 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 C22orf39Q6P5X5 142 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 OLFML1Q6UWY5 402 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 MON1BQ7L1V2 547 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 PARS2Q7L3T8 475 aaKnown RBP17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 CCNJLQ8IV13 435 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 DENND6BQ8NEG7 585 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 CMKLR1Q99788 373 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 C11orf70Q9BRQ4 267 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 C2orf49Q9BVC5 232 aaPredicted RBP17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 FAM204AQ9H8W3 233 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 POPDC2Q9HBU9 364 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 COX16Q9P0S2 106 aa17.75■□□□□ 0.43
TRAPPC3-209ENST00000616395 NBASA2RRP1 2371 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 CCDC66A2RUB6 948 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 M0QYT0 321 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 CTIFO43310 598 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 BUB1BO60566 1050 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 CLDN11O75508 207 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 SLC2A3P11169 496 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 MMP8P22894 467 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 CD82P27701 267 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 CCR1P32246 355 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 CLCN6P51797 869 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 YWHAZP63104 245 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 PPARDQ03181 441 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 DNAJC24Q6P3W2 148 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 DCUN1D2Q6PH85 259 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 DEFB106AQ8N104 65 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 Q8N9G6 341 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 LRRC57Q8N9N7 239 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 SCG3Q8WXD2 468 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 ASB12Q8WXK4 309 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 ARHGEF26Q96DR7 871 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 IP6K2Q9UHH9 426 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 GGT7Q9UJ14 662 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 GPR34Q9UPC5 381 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 ITM2BQ9Y287 266 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 HS3ST4Q9Y661 456 aa17.74■□□□□ 0.43
TRAPPC3-209ENST00000616395 TSPAN6O43657 245 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 ZNF821O75541 412 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 RHOCP08134 193 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 MCM3P25205 808 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 IGFALSP35858 605 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 ABL2P42684 1182 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 MESDQ14696 234 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 ELOCQ15369 112 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 LVRNQ6Q4G3 990 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 MACC1Q6ZN28 852 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 FSTL5Q8N475 847 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 C9orf43Q8TAL5 461 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 NKD1Q969G9 470 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 MIB2Q96AX9 1013 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 CENPTQ96BT3 561 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 C18orf8Q96DM3 657 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 TLR10Q9BXR5 811 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 ARGLU1Q9NWB6 273 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 DDIT4Q9NX09 232 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 ANAPC7Q9UJX3 599 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 RNF215Q9Y6U7 377 aa17.73■□□□□ 0.43
TRAPPC3-209ENST00000616395 TMEM110-MUSTN1A8MSY1 372 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 GOLGA8SH3BPF8 625 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 STMND1H3BQB6 276 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 NEMP1O14524 444 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 CNTN5O94779 1100 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 CDH4P55283 916 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 YPEL5P62699 121 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 PPP2R5EQ16537 467 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 ODF2Q5BJF6 829 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 OTUD1Q5VV17 481 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 TMPRSS9Q7Z410 1059 aa17.72■□□□□ 0.43
TRAPPC3-209ENST00000616395 PHLDB2Q86SQ0 1253 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms