RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 HSMCR30P0CW71 290 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 PSMD7P51665 324 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 PMF1Q6P1K2 205 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 ADGRD1Q6QNK2 874 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 CLYBLQ8N0X4 340 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 COPS8Q99627 209 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 STMN3Q9NZ72 180 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 NOS3P29474 1203 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 UBE3AQ05086 875 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 HSPA14Q0VDF9 509 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 CYP1B1Q16678 543 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 CERS6Q6ZMG9 384 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 CUZD1Q86UP6 607 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 ZNF614Q8N883 585 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 ZSCAN18Q8TBC5 510 aaPredicted RBP9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 KCTD4Q8WVF5 259 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 LINGO1Q96FE5 620 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 SLC25A51Q9H1U9 297 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 SCN8AQ9UQD0 1980 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 SHOX2O60902 331 aaPredicted RBP9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 NDST3O95803 873 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 EOMESO95936 686 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 CHRNB2P17787 502 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 PRDX6P30041 224 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 CDH4P55283 916 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 ELP6Q0PNE2 266 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 KCNA10Q16322 511 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 CCDC103Q8IW40 242 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 MRPS26Q9BYN8 205 aaKnown RBP9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 RIBC2Q9H4K1 309 aa9.15□□□□□ -0.94
SPTBN1-207ENST00000615901 MYL12BO14950 172 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 TCF3P15923 654 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 L1CAMP32004 1257 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 ABCG1P45844 678 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 SH3D19Q5HYK7 790 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 C16orf46Q6P387 395 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 DQX1Q8TE96 717 aaKnown RBP9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 Q9Y3F1 56 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 SOWAHBA6NEL2 793 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 BCL10O95999 233 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 MC4RP32245 332 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 OR1D2P34982 312 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 TAF10Q12962 218 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 GALNT3Q14435 633 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 CCDC92Q53HC0 331 aaPredicted RBP9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 C10orf107Q8IVU9 208 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 ZNF384Q8TF68 577 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 SLCO2A1Q92959 643 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 FUBP3Q96I24 572 aaKnown RBP eCLIP9.15□□□□□ -0.955e-8■■□□□ 11.6
SPTBN1-207ENST00000615901 Q96MT0 163 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 FZD8Q9H461 694 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 TREHO43280 583 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 ATP6V1C1P21283 382 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 MRPS22P82650 360 aaKnown RBP9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 ZNHIT3Q15649 155 aaPredicted RBP9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 INAQ16352 499 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 MOB2Q70IA6 237 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 ITCHQ96J02 903 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 MAGEH1Q9H213 219 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 CACNA2D2Q9NY47 1150 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 PADI3Q9ULW8 664 aa9.15□□□□□ -0.95
SPTBN1-207ENST00000615901 ADSSP30520 456 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 LILRA4P59901 499 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 PWP1Q13610 501 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 GSTA3Q16772 222 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 LSM12Q3MHD2 195 aaKnown RBP9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 XKR6Q5GH73 641 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 MPP5Q8N3R9 675 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 CPA6Q8N4T0 437 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 PIF1Q9H611 641 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 XPNPEP1Q9NQW7 623 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 ATG13O75143 517 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 SLC22A3O75751 556 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 ST13P50502 369 aaKnown RBP9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 UBAP2LQ14157 1087 aaKnown RBP9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 CCDC185Q8N715 623 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 CPT1BQ92523 772 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 MYDGFQ969H8 173 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 HDAC10Q969S8 669 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 HTATIP2Q9BUP3 242 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 CFAP97Q9P2B7 532 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 TCAF1Q9Y4C2 921 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 GLYATL1P3A0A0U1RQE8 302 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 SLC22A2O15244 555 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 PDE9AO76083 593 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 TACR2P21452 398 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 AP1S1P61966 158 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 FAM151BQ6UXP7 276 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 PYDC1Q8WXC3 89 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 HSD3B7Q9H2F3 369 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 PNPLA3Q9NST1 481 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 MAGEL2Q9UJ55 1249 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 URADA6NGE7 173 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 FAM163BP0C2L3 166 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 PTDSS1P48651 473 aaKnown RBP9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 PRMT2P55345 433 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 ZYG11AQ6WRX3 759 aa9.14□□□□□ -0.95
SPTBN1-207ENST00000615901 STK32CQ86UX6 486 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms