RNA–Protein interactions for RNA: ENST00000614056.4

PDCD2-215, Transcript of programmed cell death 2, human

TSL 2 BASIC

Gene PDCD2, Length 1,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD2-215	ENST00000614056	CCNJL	Q8IV13	435 aa		27.58	■■■□□ 2.01
PDCD2-215	ENST00000614056	OR6C4	Q8NGE1	309 aa		27.58	■■■□□ 2.01
PDCD2-215	ENST00000614056	SNRNP27	Q8WVK2	155 aa	Known RBP	27.58	■■■□□ 2.01
PDCD2-215	ENST00000614056	WBP1	Q96G27	269 aa		27.58	■■■□□ 2.01
PDCD2-215	ENST00000614056	GBP4	Q96PP9	640 aa		27.58	■■■□□ 2.01
PDCD2-215	ENST00000614056	LGR4	Q9BXB1	951 aa		27.58	■■■□□ 2.01
PDCD2-215	ENST00000614056	TMEM168	Q9H0V1	697 aa		27.58	■■■□□ 2.01
PDCD2-215	ENST00000614056	SUDS3	Q9H7L9	328 aa	Predicted RBP	27.58	■■■□□ 2.01
PDCD2-215	ENST00000614056	CYP4F12	Q9HCS2	524 aa		27.58	■■■□□ 2.01
PDCD2-215	ENST00000614056	ZNF462	Q96JM2	2506 aa		27.57	■■■□□ 2
PDCD2-215	ENST00000614056	NSUN2	Q08J23	767 aa	Known RBP eCLIP	27.57	■■■□□ 2
PDCD2-215	ENST00000614056	RFTN1	Q14699	578 aa	Predicted RBP	27.57	■■■□□ 2
PDCD2-215	ENST00000614056	PELI3	Q8N2H9	469 aa		27.57	■■■□□ 2
PDCD2-215	ENST00000614056	CCL4L1	Q8NHW4	92 aa		27.57	■■■□□ 2
PDCD2-215	ENST00000614056	HAUS4	Q9H6D7	363 aa		27.57	■■■□□ 2
PDCD2-215	ENST00000614056	WDR26	Q9H7D7	661 aa		27.57	■■■□□ 2
PDCD2-215	ENST00000614056	CWC15	Q9P013	229 aa	Known RBP	27.57	■■■□□ 2
PDCD2-215	ENST00000614056	B4GALT6	Q9UBX8	382 aa		27.57	■■■□□ 2
PDCD2-215	ENST00000614056	CNOT8	Q9UFF9	292 aa	Known RBP	27.57	■■■□□ 2
PDCD2-215	ENST00000614056	PISD	Q9UG56	409 aa		27.57	■■■□□ 2
PDCD2-215	ENST00000614056	MYO6	Q9UM54	1294 aa		27.57	■■■□□ 2
PDCD2-215	ENST00000614056	SCN8A	Q9UQD0	1980 aa		27.57	■■■□□ 2
PDCD2-215	ENST00000614056	UNC13C	Q8NB66	2214 aa		27.56	■■■□□ 2
PDCD2-215	ENST00000614056	TMX2-CTNND1	H3BSU7	103 aa		27.56	■■■□□ 2
PDCD2-215	ENST00000614056	TRAFD1	O14545	582 aa	Predicted RBP	27.56	■■■□□ 2
PDCD2-215	ENST00000614056	FTL	P02792	175 aa	Predicted RBP	27.56	■■■□□ 2
PDCD2-215	ENST00000614056	KEL	P23276	732 aa		27.56	■■■□□ 2
PDCD2-215	ENST00000614056	SLC10A7	Q0GE19	358 aa		27.56	■■■□□ 2
PDCD2-215	ENST00000614056	EIF3I	Q13347	325 aa	Known RBP	27.56	■■■□□ 2
PDCD2-215	ENST00000614056	LBR	Q14739	615 aa	Known RBP	27.56	■■■□□ 2
PDCD2-215	ENST00000614056	DENND2C	Q68D51	928 aa		27.56	■■■□□ 2
PDCD2-215	ENST00000614056	PDCD6IP	Q8WUM4	868 aa	Known RBP	27.56	■■■□□ 2
PDCD2-215	ENST00000614056	ZNF653	Q96CK0	615 aa		27.56	■■■□□ 2
PDCD2-215	ENST00000614056	TMEM74	Q96NL1	305 aa		27.56	■■■□□ 2
PDCD2-215	ENST00000614056	DPEP2	Q9H4A9	486 aa		27.56	■■■□□ 2
PDCD2-215	ENST00000614056	MYO1A	Q9UBC5	1043 aa		27.56	■■■□□ 2
PDCD2-215	ENST00000614056	SEPT3	Q9UH03	358 aa		27.56	■■■□□ 2
PDCD2-215	ENST00000614056	RNF215	Q9Y6U7	377 aa		27.56	■■■□□ 2
PDCD2-215	ENST00000614056	CAPN8	A6NHC0	703 aa		27.55	■■■□□ 2
PDCD2-215	ENST00000614056	NOBOX	O60393	691 aa		27.55	■■■□□ 2
PDCD2-215	ENST00000614056	LRCH4	O75427	683 aa		27.55	■■■□□ 2
PDCD2-215	ENST00000614056	JMJD7	P0C870	316 aa		27.55	■■■□□ 2
PDCD2-215	ENST00000614056	GLB1	P16278	677 aa		27.55	■■■□□ 2
PDCD2-215	ENST00000614056	RENBP	P51606	427 aa		27.55	■■■□□ 2
PDCD2-215	ENST00000614056	AP1S1	P61966	158 aa		27.55	■■■□□ 2
PDCD2-215	ENST00000614056	DPYS	Q14117	519 aa		27.55	■■■□□ 2
PDCD2-215	ENST00000614056	ZNF235	Q14590	738 aa		27.55	■■■□□ 2
PDCD2-215	ENST00000614056	CERCAM	Q5T4B2	595 aa		27.55	■■■□□ 2
PDCD2-215	ENST00000614056	TMCO4	Q5TGY1	634 aa		27.55	■■■□□ 2
PDCD2-215	ENST00000614056	PNCK	Q6P2M8	343 aa		27.55	■■■□□ 2
PDCD2-215	ENST00000614056	ZNF571	Q7Z3V5	609 aa	Predicted RBP	27.55	■■■□□ 2
PDCD2-215	ENST00000614056	PSKH2	Q96QS6	385 aa		27.55	■■■□□ 2
PDCD2-215	ENST00000614056	CCNL2	Q96S94	520 aa	Predicted RBP	27.55	■■■□□ 2
PDCD2-215	ENST00000614056	LOXL2	Q9Y4K0	774 aa		27.55	■■■□□ 2
PDCD2-215	ENST00000614056	CCKBR	P32239	447 aa		27.54	■■■□□ 2
PDCD2-215	ENST00000614056	ANP32A	P39687	249 aa	Known RBP	27.54	■■■□□ 2
PDCD2-215	ENST00000614056	TYRO3	Q06418	890 aa		27.54	■■■□□ 2
PDCD2-215	ENST00000614056	ARHGEF7	Q14155	803 aa		27.54	■■■□□ 2
PDCD2-215	ENST00000614056	C14orf28	Q4W4Y0	310 aa		27.54	■■■□□ 2
PDCD2-215	ENST00000614056	E4F1	Q66K89	784 aa	Predicted RBP	27.54	■■■□□ 2
PDCD2-215	ENST00000614056	SPECC1L	Q69YQ0	1117 aa		27.54	■■■□□ 2
PDCD2-215	ENST00000614056	OGFOD3	Q6PK18	319 aa		27.54	■■■□□ 2
PDCD2-215	ENST00000614056	NUS1	Q96E22	293 aa		27.54	■■■□□ 2
PDCD2-215	ENST00000614056	RTN4	Q9NQC3	1192 aa	Known RBP	27.54	■■■□□ 2
PDCD2-215	ENST00000614056	LRIT1	Q9P2V4	623 aa		27.54	■■■□□ 2
PDCD2-215	ENST00000614056	APPL1	Q9UKG1	709 aa		27.54	■■■□□ 2
PDCD2-215	ENST00000614056	PCDHGC4	Q9Y5F7	938 aa		27.54	■■■□□ 2
PDCD2-215	ENST00000614056	TNFRSF10C	O14798	259 aa		27.53	■■■□□ 2
PDCD2-215	ENST00000614056	KRT10	P13645	584 aa		27.53	■■■□□ 2
PDCD2-215	ENST00000614056	TRIM23	P36406	574 aa		27.53	■■■□□ 2
PDCD2-215	ENST00000614056	TGIF1	Q15583	401 aa		27.53	■■■□□ 2
PDCD2-215	ENST00000614056	SMTNL2	Q2TAL5	461 aa		27.53	■■■□□ 2
PDCD2-215	ENST00000614056	CCDC183	Q5T5S1	534 aa		27.53	■■■□□ 2
PDCD2-215	ENST00000614056	SPRED1	Q7Z699	444 aa		27.53	■■■□□ 2
PDCD2-215	ENST00000614056	FNIP1	Q8TF40	1166 aa		27.53	■■■□□ 2
PDCD2-215	ENST00000614056	COQ10A	Q96MF6	247 aa		27.53	■■■□□ 2
PDCD2-215	ENST00000614056	ZWILCH	Q9H900	591 aa		27.53	■■■□□ 2
PDCD2-215	ENST00000614056	PCDHGA7	Q9Y5G6	932 aa		27.53	■■■□□ 2
PDCD2-215	ENST00000614056	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	27.52	■■■□□ 2
PDCD2-215	ENST00000614056	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	27.52	■■■□□ 2
PDCD2-215	ENST00000614056	PRSS38	A1L453	326 aa		27.52	■■■□□ 2
PDCD2-215	ENST00000614056		H3BRJ5	948 aa		27.52	■■■□□ 2
PDCD2-215	ENST00000614056	CP	P00450	1065 aa		27.52	■■■□□ 2
PDCD2-215	ENST00000614056	HOXC4	P09017	264 aa	Predicted RBP	27.52	■■■□□ 2
PDCD2-215	ENST00000614056	ITIH1	P19827	911 aa		27.52	■■■□□ 2
PDCD2-215	ENST00000614056	AMPD1	P23109	780 aa		27.52	■■■□□ 2
PDCD2-215	ENST00000614056	HCAR3	P49019	387 aa		27.52	■■■□□ 2
PDCD2-215	ENST00000614056	HLTF	Q14527	1009 aa	Known RBP eCLIP	27.52	■■■□□ 2
PDCD2-215	ENST00000614056	CNGA3	Q16281	694 aa		27.52	■■■□□ 2
PDCD2-215	ENST00000614056	ANO6	Q4KMQ2	910 aa		27.52	■■■□□ 2
PDCD2-215	ENST00000614056	PSTK	Q8IV42	348 aa	Known RBP	27.52	■■■□□ 2
PDCD2-215	ENST00000614056	LZTR1	Q8N653	840 aa		27.52	■■■□□ 2
PDCD2-215	ENST00000614056	HSPH1	Q92598	858 aa		27.52	■■■□□ 2
PDCD2-215	ENST00000614056	ZNF599	Q96NL3	588 aa		27.52	■■■□□ 2
PDCD2-215	ENST00000614056	CARS2	Q9HA77	564 aa	Known RBP	27.52	■■■□□ 2
PDCD2-215	ENST00000614056	ETNK2	Q9NVF9	386 aa		27.52	■■■□□ 2
PDCD2-215	ENST00000614056	SCIN	Q9Y6U3	715 aa		27.52	■■■□□ 2
PDCD2-215	ENST00000614056	GOLGA6L22	H0YM25	854 aa		27.51	■■□□□ 1.99
PDCD2-215	ENST00000614056	DDX3X	O00571	662 aa	Known RBP eCLIP	27.51	■■□□□ 1.99	3e-13	■■■■□ 26.3
PDCD2-215	ENST00000614056	GZMA	P12544	262 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms