RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 OR8K1Q8NGG5 319 aa22.8■■□□□ 1.24
FAM228B-208ENST00000613899 PCDH19Q8TAB3 1148 aa22.8■■□□□ 1.24
FAM228B-208ENST00000613899 SNIP1Q8TAD8 396 aaKnown RBP22.8■■□□□ 1.24
FAM228B-208ENST00000613899 ZNHIT6Q9NWK9 470 aaKnown RBP22.8■■□□□ 1.24
FAM228B-208ENST00000613899 PHTF1Q9UMS5 762 aa22.8■■□□□ 1.24
FAM228B-208ENST00000613899 DGKBQ9Y6T7 804 aa22.8■■□□□ 1.24
FAM228B-208ENST00000613899 CACNA1GO43497 2377 aa22.8■■□□□ 1.24
FAM228B-208ENST00000613899 COL27A1Q8IZC6 1860 aaPredicted RBP22.79■■□□□ 1.24
FAM228B-208ENST00000613899 RP1P56715 2156 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 TLX3O43711 291 aaPredicted RBP22.79■■□□□ 1.24
FAM228B-208ENST00000613899 TNFP01375 233 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 CELA2BP08218 269 aaPredicted RBP22.79■■□□□ 1.24
FAM228B-208ENST00000613899 KRT7P08729 469 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 HOXC4P09017 264 aaPredicted RBP22.79■■□□□ 1.24
FAM228B-208ENST00000613899 CYP2A6P11509 494 aaPredicted RBP22.79■■□□□ 1.24
FAM228B-208ENST00000613899 TGM2P21980 687 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 VIPR1P32241 457 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 ACTN2P35609 894 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 GARSP41250 739 aaKnown RBP22.79■■□□□ 1.24
FAM228B-208ENST00000613899 ABCG1P45844 678 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 GALNT2Q10471 571 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 TRAF2Q12933 501 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 PAFAH1B3Q15102 231 aaKnown RBP22.79■■□□□ 1.24
FAM228B-208ENST00000613899 TSR1Q2NL82 804 aaKnown RBP22.79■■□□□ 1.24
FAM228B-208ENST00000613899 NCBP2-AS2Q69YL0 99 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 TIGD7Q6NT04 549 aaPredicted RBP22.79■■□□□ 1.24
FAM228B-208ENST00000613899 RD3Q7Z3Z2 195 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 ARL10Q8N8L6 244 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 KCTD6Q8NC69 237 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 OR56A4Q8NGH8 313 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 WDR48Q8TAF3 677 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 GRAMD1AQ96CP6 724 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 PDXPQ96GD0 296 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 WDR26Q9H7D7 661 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 HAUS2Q9NVX0 235 aa22.79■■□□□ 1.24
FAM228B-208ENST00000613899 A8MX80 341 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 RRP8O43159 456 aaKnown RBP22.78■■□□□ 1.24
FAM228B-208ENST00000613899 TCEA3O75764 348 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 GM2AP17900 193 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 MAN1A1P33908 653 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 TRIM23P36406 574 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 EIF2S3P41091 472 aaKnown RBP22.78■■□□□ 1.24
FAM228B-208ENST00000613899 CNGA3Q16281 694 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 ASTE1Q2TB18 679 aaPredicted RBP22.78■■□□□ 1.24
FAM228B-208ENST00000613899 TBC1D25Q3MII6 688 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 ARMC12Q5T9G4 340 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 LRRC69Q6ZNQ3 347 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 PDZD3Q86UT5 571 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 TEX26Q8N6G2 289 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 FGF11Q92914 225 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 FUBP1Q96AE4 644 aaKnown RBP22.78■■□□□ 1.24
FAM228B-208ENST00000613899 NUS1Q96E22 293 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 COQ10AQ96MF6 247 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 RBM15Q96T37 977 aaKnown RBP eCLIP22.78■■□□□ 1.24
FAM228B-208ENST00000613899 PACSIN1Q9BY11 444 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 POLR1EQ9GZS1 481 aaKnown RBP22.78■■□□□ 1.24
FAM228B-208ENST00000613899 NT5MQ9NPB1 228 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 PADI4Q9UM07 663 aa22.78■■□□□ 1.24
FAM228B-208ENST00000613899 PSMD11O00231 422 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 PDE2AO00408 941 aaPredicted RBP22.77■■□□□ 1.24
FAM228B-208ENST00000613899 TNFRSF10CO14798 259 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 AKR1B10O60218 316 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 USP12O75317 370 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 HEXIM1O94992 359 aaKnown RBP22.77■■□□□ 1.24
FAM228B-208ENST00000613899 PGLSO95336 258 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 TMEM253P0C7T8 217 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 KRT10P13645 584 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 ISXQ2M1V0 245 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 ATP13A4Q4VNC1 1196 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 ANKRD20A8PQ5CZ79 823 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 PERM1Q5SV97 790 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 PNCKQ6P2M8 343 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 RBM44Q6ZP01 1051 aaKnown RBP22.77■■□□□ 1.24
FAM228B-208ENST00000613899 USP45Q70EL2 814 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 LSMEM2Q8N112 164 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 KYQ8NBH2 561 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 TSPY26PQ9H489 355 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 FGF22Q9HCT0 170 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 NBEAQ8NFP9 2946 aa22.77■■□□□ 1.24
FAM228B-208ENST00000613899 TMEM202A6NGA9 273 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 GABREP78334 506 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 ARHGEF7Q14155 803 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 TCEA2Q15560 299 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 IFI16Q16666 785 aaKnown RBP22.76■■□□□ 1.23
FAM228B-208ENST00000613899 ZFYVE27Q5T4F4 411 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 CRTC1Q6UUV9 634 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 CPNE8Q86YQ8 564 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 VSTM4Q8IW00 320 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 NDUFAF2Q8N183 169 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 OR1E3Q8WZA6 343 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 MAML1Q92585 1016 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 FATE1Q969F0 183 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 FAF2Q96CS3 445 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 SCRN2Q96FV2 425 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 MCCC1Q96RQ3 725 aaPredicted RBP22.76■■□□□ 1.23
FAM228B-208ENST00000613899 SEMA3CQ99985 751 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 CCDC3Q9BQI4 270 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 POLR1BQ9H9Y6 1135 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 ABHD10Q9NUJ1 306 aa22.76■■□□□ 1.23
FAM228B-208ENST00000613899 SIRPGQ9P1W8 387 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms