RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 SLC39A1Q9NY26 324 aa17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 LHX3Q9UBR4 397 aa17.27■□□□□ 0.36
CSNK1E-215ENST00000612795 USP9XQ93008 2570 aaPredicted RBP17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 RECQL5O94762 991 aaPredicted RBP17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 LSM8O95777 96 aaKnown RBP17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 ELFN1P0C7U0 828 aa17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 CCNB1P14635 433 aa17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 CYP11B1P15538 503 aa17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 STAT1P42224 750 aa17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 PPM1FP49593 454 aaPredicted RBP17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 CDC20Q12834 499 aa17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 ILF3Q12906 894 aaKnown RBP eCLIP17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 RAPGEF1Q13905 1077 aa17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 SEPT6Q14141 434 aa17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 NR1D2Q14995 579 aa17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 LACTB2Q53H82 288 aaPredicted RBP17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 DCAF12Q5T6F0 453 aa17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 ARCQ7LC44 396 aa17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 SLC45A3Q96JT2 553 aa17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 ZNF641Q96N77 438 aaPredicted RBP17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 KLC2Q9H0B6 622 aa17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 SPATS2LQ9NUQ6 558 aaKnown RBP17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 SPENQ96T58 3664 aaKnown RBP17.26■□□□□ 0.35
CSNK1E-215ENST00000612795 PDE2AO00408 941 aaPredicted RBP17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 NKX2-8O15522 239 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 TEX33O43247 280 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 DUX1O43812 170 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 ECEL1O95672 775 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 CD1CP29017 333 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 RAB15P59190 212 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 NAA35Q5VZE5 725 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 ELOA2Q8IYF1 753 aaPredicted RBP17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 CCDC185Q8N715 623 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 RTL3Q8N8U3 475 aaKnown RBP17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 OR4D9Q8NGE8 314 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 RXFP2Q8WXD0 754 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 CPA5Q8WXQ8 436 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 ABHD17AQ96GS6 310 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 EFHD1Q9BUP0 239 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 LGR4Q9BXB1 951 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 MAGEB5Q9BZ81 275 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 NOL6Q9H6R4 1146 aaKnown RBP17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 TAAR2Q9P1P5 351 aa17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 UBA2Q9UBT2 640 aaPredicted RBP17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 UTP20O75691 2785 aaKnown RBP17.25■□□□□ 0.35
CSNK1E-215ENST00000612795 NOTCH2Q04721 2471 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 CFAP69A5D8W1 941 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 PRR19A6NJB7 356 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 EFCAB7A8K855 629 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 RASA4BC9J798 803 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 RASA4O43374 803 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 FGF1P05230 155 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 HOXC4P09017 264 aaPredicted RBP17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 THRAP10827 490 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 MYCLP1P12525 358 aaPredicted RBP17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 MPSTP25325 297 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 EPHB2P29323 1055 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 SERPINA4P29622 427 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 GPR3P46089 330 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 MTIF2P46199 727 aaKnown RBP17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 YBEYP58557 167 aaPredicted RBP17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 KLRB1Q12918 225 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 RALGDSQ12967 914 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 CYTH1Q15438 398 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 PARP15Q460N3 678 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 CCDC14Q49A88 953 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 NKAIN2Q5VXU1 208 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 ANKS6Q68DC2 871 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 STRADAQ7RTN6 431 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 PHLDB2Q86SQ0 1253 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 C17orf82Q86X59 251 aaPredicted RBP17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 ZSWIM9Q86XI8 627 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 CAMK1DQ8IU85 385 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 NLGN4XQ8N0W4 816 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 NLGN4YQ8NFZ3 816 aaPredicted RBP17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 APOBEC4Q8WW27 367 aaKnown RBP17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 MIB2Q96AX9 1013 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 TEFMQ96QE5 360 aaKnown RBP17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 TUBGCP5Q96RT8 1024 aa17.24■□□□□ 0.35
CSNK1E-215ENST00000612795 B4E171 279 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 MTSS1O43312 755 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 OAS2P29728 719 aaKnown RBP17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 CSF2RBP32927 897 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 TRIM23P36406 574 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 TSPAN7P41732 249 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 GNPDA1P46926 289 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 NOMO3P69849 1222 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 ACOX1Q15067 660 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 DEFB109BQ30KR1 87 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 HIST2H2BCQ6DN03 193 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 SLC30A9Q6PML9 568 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 LIPIQ6XZB0 460 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 GPT2Q8TD30 523 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 FAM172AQ8WUF8 416 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 PATE1Q8WXA2 126 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 DPYSL5Q9BPU6 564 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 ATP13A3Q9H7F0 1226 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 OCIAD1Q9NX40 245 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 PILRAQ9UKJ1 303 aa17.23■□□□□ 0.35
CSNK1E-215ENST00000612795 AK4P27144 223 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms