RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 TRIM23P36406 574 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 CCL7P80098 99 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 CFHR1Q03591 330 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 VAC14Q08AM6 782 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 EIF3IQ13347 325 aaKnown RBP17.84■□□□□ 0.45
SSBP1-215ENST00000612337 LBRQ14739 615 aaKnown RBP17.84■□□□□ 0.45
SSBP1-215ENST00000612337 ANO6Q4KMQ2 910 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 TAF1BQ53T94 588 aaPredicted RBP17.84■□□□□ 0.45
SSBP1-215ENST00000612337 TMCO4Q5TGY1 634 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 B3GNT8Q7Z7M8 397 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 SPOCK2Q92563 424 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 NSMCE3Q96MG7 304 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 ZWILCHQ9H900 591 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 FGF22Q9HCT0 170 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 AHCTF1Q8WYP5 2266 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 PIEZO2Q9H5I5 2752 aa17.84■□□□□ 0.45
SSBP1-215ENST00000612337 SETXQ7Z333 2677 aaKnown RBP17.83■□□□□ 0.44
SSBP1-215ENST00000612337 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.83■□□□□ 0.44
SSBP1-215ENST00000612337 A0A1W2PQC6 194 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 DDX3XO00571 662 aaKnown RBP eCLIP17.83■□□□□ 0.447e-9■□□□□ 11
SSBP1-215ENST00000612337 PLD2O14939 933 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 MYBL1P10243 752 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 PCK1P35558 622 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 FILIP1LQ4L180 1135 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 E4F1Q66K89 784 aaPredicted RBP17.83■□□□□ 0.44
SSBP1-215ENST00000612337 OGFOD3Q6PK18 319 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 TAF8Q7Z7C8 310 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 TP53INP2Q8IXH6 220 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 FBXO39Q8N4B4 442 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 ZNF653Q96CK0 615 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 TRIM11Q96F44 468 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 STRADBQ9C0K7 418 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 LRRN3Q9H3W5 708 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 WDR26Q9H7D7 661 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 MRPL47Q9HD33 250 aaKnown RBP17.83■□□□□ 0.44
SSBP1-215ENST00000612337 MRPL40Q9NQ50 206 aaKnown RBP17.83■□□□□ 0.44
SSBP1-215ENST00000612337 APPL1Q9UKG1 709 aa17.83■□□□□ 0.44
SSBP1-215ENST00000612337 FLNBO75369 2602 aaKnown RBP17.83■□□□□ 0.44
SSBP1-215ENST00000612337 A0A1W2PQ67 120 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 CAPN8A6NHC0 703 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 SMTNL1A8MU46 457 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 H3BRJ5 948 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 HTRA2O43464 458 aaPredicted RBP17.82■□□□□ 0.44
SSBP1-215ENST00000612337 PNLIPP16233 465 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 GLB1P16278 677 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 CCKBRP32239 447 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 HSPA9P38646 679 aaKnown RBP17.82■□□□□ 0.44
SSBP1-215ENST00000612337 INHBCP55103 352 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 KLHL30Q0D2K2 578 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 SLC10A7Q0GE19 358 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 CLN3Q13286 438 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 ACOX1Q15067 660 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 DPYSL2Q16555 572 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 CERCAMQ5T4B2 595 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 PNCKQ6P2M8 343 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 RAB11FIP2Q7L804 512 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 FAM46DQ8NEK8 389 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 TMEM74Q96NL1 305 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 FOXP3Q9BZS1 431 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 EPB41L5Q9HCM4 733 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 B4GALT6Q9UBX8 382 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 PCDHGA7Q9Y5G6 932 aa17.82■□□□□ 0.44
SSBP1-215ENST00000612337 ARHGEF17Q96PE2 2063 aaPredicted RBP17.81■□□□□ 0.44
SSBP1-215ENST00000612337 A0A1B0GTH6 734 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 A8MX80 341 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 K7ENP7 123 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 PDE2AO00408 941 aaPredicted RBP17.81■□□□□ 0.44
SSBP1-215ENST00000612337 NOBOXO60393 691 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 SOCS5O75159 536 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 PEX11BO96011 259 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 CR2P20023 1033 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 IL1R2P27930 398 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 UGT1A5P35504 534 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 ARL4AP40617 200 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 ZNF235Q14590 738 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 TSR1Q2NL82 804 aaKnown RBP17.81■□□□□ 0.44
SSBP1-215ENST00000612337 BOLA3Q53S33 107 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 INO80CQ6PI98 192 aaPredicted RBP17.81■□□□□ 0.44
SSBP1-215ENST00000612337 CCNJLQ8IV13 435 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 PELI3Q8N2H9 469 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 TTC9Q92623 222 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 COQ10AQ96MF6 247 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.81■□□□□ 0.44
SSBP1-215ENST00000612337 LGR4Q9BXB1 951 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 TMEM168Q9H0V1 697 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 ISCUQ9H1K1 167 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 CYP4F12Q9HCS2 524 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 ETNK2Q9NVF9 386 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 KCTD5Q9NXV2 234 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 TMEM63CQ9P1W3 806 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 MYO1AQ9UBC5 1043 aa17.81■□□□□ 0.44
SSBP1-215ENST00000612337 ASH1LQ9NR48 2969 aaKnown RBP17.8■□□□□ 0.44
SSBP1-215ENST00000612337 TTC24A2A3L6 582 aaPredicted RBP17.8■□□□□ 0.44
SSBP1-215ENST00000612337 AMPD1P23109 780 aa17.8■□□□□ 0.44
SSBP1-215ENST00000612337 HLTFQ14527 1009 aaKnown RBP eCLIP17.8■□□□□ 0.44
SSBP1-215ENST00000612337 CNGA3Q16281 694 aa17.8■□□□□ 0.44
SSBP1-215ENST00000612337 SMTNL2Q2TAL5 461 aa17.8■□□□□ 0.44
SSBP1-215ENST00000612337 C14orf28Q4W4Y0 310 aa17.8■□□□□ 0.44
SSBP1-215ENST00000612337 TMCO3Q6UWJ1 677 aa17.8■□□□□ 0.44
SSBP1-215ENST00000612337 POLNQ7Z5Q5 900 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms