RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 ASLP04424 464 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 SRPRAP08240 638 aaKnown RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 BMP1P13497 986 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 CTPS1P17812 591 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 PSMC3P17980 439 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 LPOP22079 712 aaPredicted RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 PSMA3P25788 255 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 NNMTP40261 264 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 MAGEA12P43365 314 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 CCT5P48643 541 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 SERPINB8P50452 374 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 SEC24CP53992 1094 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 RAD51Q06609 339 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 MESP2Q0VG99 397 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 RUNX3Q13761 415 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 ADGRE1Q14246 886 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 GRM3Q14832 879 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 SEPT7Q16181 437 aaKnown RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 PTPRNQ16849 979 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 GRAMD4Q6IC98 578 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 LVRNQ6Q4G3 990 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 PARM1Q6UWI2 310 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 CDHR3Q6ZTQ4 885 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 CILP2Q8IUL8 1156 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 LMNTD2Q8IXW0 634 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 TTC30BQ8N4P2 665 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 CPA6Q8N4T0 437 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 OR2A12Q8NGT7 310 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 CKAP2Q8WWK9 683 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 FGF14Q92915 247 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 CDKN2AIPNLQ96HQ2 116 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 GPR22Q99680 433 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 PAIP2Q9BPZ3 127 aaKnown RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 C12orf65Q9H3J6 166 aaKnown RBP12.34□□□□□ -0.43
CBWD1-220ENST00000612045 SUV39H2Q9H5I1 410 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 MAGEE1Q9HCI5 957 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 ELOVL2Q9NXB9 296 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 SLC17A7Q9P2U7 560 aa12.34□□□□□ -0.43
CBWD1-220ENST00000612045 GMNCA6NCL1 334 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 WASH3PC4AMC7 463 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 HAUS5O94927 633 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 SLC4A1P02730 911 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 ALPIP09923 528 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 POU3F3P20264 500 aaPredicted RBP12.33□□□□□ -0.44
CBWD1-220ENST00000612045 SP100P23497 879 aaPredicted RBP12.33□□□□□ -0.44
CBWD1-220ENST00000612045 TYK2P29597 1187 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 CRHR1P34998 444 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 HADHAP40939 763 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 RECQLP46063 649 aaPredicted RBP12.33□□□□□ -0.44
CBWD1-220ENST00000612045 LEPRP48357 1165 aaKnown RBP12.33□□□□□ -0.44
CBWD1-220ENST00000612045 CD151P48509 253 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 IL9RQ01113 521 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 PDE1CQ14123 709 aaPredicted RBP12.33□□□□□ -0.44
CBWD1-220ENST00000612045 COL19A1Q14993 1142 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 HHATQ5VTY9 493 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 CMC1Q7Z7K0 106 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 GALNT7Q86SF2 657 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 ZSWIM9Q86XI8 627 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 OTUD6BQ8N6M0 293 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 PAF1Q8N7H5 531 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 CHST14Q8NCH0 376 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 ACVR1CQ8NER5 493 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 OR4L1Q8NH43 312 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 NXPE3Q969Y0 559 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 ECHDC3Q96DC8 303 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 IQCGQ9H095 443 aaKnown RBP12.33□□□□□ -0.44
CBWD1-220ENST00000612045 RABEP2Q9H5N1 569 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 ZDHHC6Q9H6R6 413 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 FBXO6Q9NRD1 293 aaPredicted RBP12.33□□□□□ -0.44
CBWD1-220ENST00000612045 SNX15Q9NRS6 342 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 POLR3BQ9NW08 1133 aaPredicted RBP12.33□□□□□ -0.44
CBWD1-220ENST00000612045 GTSE1Q9NYZ3 720 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 MARCH4Q9P2E8 410 aaPredicted RBP12.33□□□□□ -0.44
CBWD1-220ENST00000612045 GRID1Q9ULK0 1009 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 PLLPQ9Y342 182 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 ZNF711Q9Y462 761 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 BRWD1Q9NSI6 2320 aa12.33□□□□□ -0.44
CBWD1-220ENST00000612045 TMEM265A0A087WTH1 108 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 PRRT4C9JH25 899 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 STX7O15400 261 aaKnown RBP12.32□□□□□ -0.44
CBWD1-220ENST00000612045 CD3EAPO15446 510 aaKnown RBP12.32□□□□□ -0.44
CBWD1-220ENST00000612045 ETV4P43268 484 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 KDSRQ06136 332 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 PPM1JQ5JR12 505 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 SMRP1Q8NCR6 262 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 GPR150Q8NGU9 434 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 TTC8Q8TAM2 541 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 MAGEB18Q96M61 343 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 ZNF641Q96N77 438 aaPredicted RBP12.32□□□□□ -0.44
CBWD1-220ENST00000612045 FAM111AQ96PZ2 611 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 CATSPERZQ9NTU4 200 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 SLC39A10Q9ULF5 831 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 PHTF1Q9UMS5 762 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 SLC8A2Q9UPR5 921 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 DENND4AQ7Z401 1863 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 TRIOBPQ9H2D6 2365 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 A0A0U1RQS6 177 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 ECI2O75521 394 aa12.32□□□□□ -0.44
CBWD1-220ENST00000612045 TOP3BO95985 862 aaKnown RBP12.32□□□□□ -0.44
CBWD1-220ENST00000612045 UGT2B4P06133 528 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms