RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 MRPL57Q9BQC6 102 aaKnown RBP11.47□□□□□ -0.57
LINC01278-204ENST00000609143 GATA5Q9BWX5 397 aaPredicted RBP11.47□□□□□ -0.57
LINC01278-204ENST00000609143 LRMDAQ9H2I8 198 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 GPAMQ9HCL2 828 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 ARHGEF3Q9NR81 526 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 HACD3Q9P035 362 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 KIAA1522Q9P206 1035 aaPredicted RBP11.47□□□□□ -0.57
LINC01278-204ENST00000609143 FCF1Q9Y324 198 aaKnown RBP11.47□□□□□ -0.57
LINC01278-204ENST00000609143 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.47□□□□□ -0.57
LINC01278-204ENST00000609143 ANKRD66B4E2M5 251 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 CBX6O95503 412 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 LPOP22079 712 aaPredicted RBP11.47□□□□□ -0.57
LINC01278-204ENST00000609143 PMLP29590 882 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 KCNJ2P63252 427 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 DLG1Q12959 904 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 CTC1Q2NKJ3 1217 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 GPR158Q5T848 1215 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 FAM91A1Q658Y4 838 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 TPGS1Q6ZTW0 290 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 METTL3Q86U44 580 aaKnown RBP11.47□□□□□ -0.57
LINC01278-204ENST00000609143 TMEM151AQ8N4L1 468 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 OR4K2Q8NGD2 314 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 MICAL1Q8TDZ2 1067 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 HEXDCQ8WVB3 486 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 NUMBLQ9Y6R0 609 aa11.47□□□□□ -0.57
LINC01278-204ENST00000609143 TARM1B6A8C7 271 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 LTA4HP09960 611 aaKnown RBP11.46□□□□□ -0.57
LINC01278-204ENST00000609143 SBK3P0C264 359 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 PTPN2P17706 415 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 SLC26A3P40879 764 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 UBE3AQ05086 875 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 CSHL1Q14406 222 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 KRT72Q14CN4 511 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 ARHGAP15Q53QZ3 475 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 CYB5D1Q6P9G0 228 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 NAPRTQ6XQN6 538 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 ALYREFQ86V81 257 aaKnown RBP11.46□□□□□ -0.57
LINC01278-204ENST00000609143 APCDD1Q8J025 514 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 KIF2BQ8N4N8 673 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 MDGA1Q8NFP4 955 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 FIBINQ8TAL6 211 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 SHKBP1Q8TBC3 707 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 SPPL3Q8TCT6 385 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 SH3RF2Q8TEC5 729 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 RAB3IPQ96QF0 476 aaPredicted RBP11.46□□□□□ -0.57
LINC01278-204ENST00000609143 MTIF3Q9H2K0 278 aaKnown RBP11.46□□□□□ -0.57
LINC01278-204ENST00000609143 INTS10Q9NVR2 710 aaKnown RBP11.46□□□□□ -0.57
LINC01278-204ENST00000609143 HCFC1R1Q9NWW0 138 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 PLK2Q9NYY3 685 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 TRIM33Q9UPN9 1127 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 ANKRD36A6QL64 1941 aa11.46□□□□□ -0.57
LINC01278-204ENST00000609143 MTCL1Q9Y4B5 1905 aaKnown RBP11.46□□□□□ -0.57
LINC01278-204ENST00000609143 SLC4A1P02730 911 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 T-ENOLP0DO92 83 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 EN2P19622 333 aaPredicted RBP11.46□□□□□ -0.58
LINC01278-204ENST00000609143 PSMA3P25788 255 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 ARRB2P32121 409 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 MAPK8P45983 427 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 STC1P52823 247 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 EPHA5P54756 1037 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 EPHB1P54762 984 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 LMAN2Q12907 356 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 TYSND1Q2T9J0 566 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 HSF5Q4G112 596 aaPredicted RBP11.46□□□□□ -0.58
LINC01278-204ENST00000609143 SPATA6LQ8N4H0 392 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 EFHBQ8N7U6 833 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.46□□□□□ -0.58
LINC01278-204ENST00000609143 NMUR2Q9GZQ4 415 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 SMG9Q9H0W8 520 aaKnown RBP11.46□□□□□ -0.58
LINC01278-204ENST00000609143 MAN1C1Q9NR34 630 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 IGSF5Q9NSI5 407 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 KLC4Q9NSK0 619 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 PNPOQ9NVS9 261 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 DNAJC28Q9NX36 388 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 LNPEPQ9UIQ6 1025 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 CRYL1Q9Y2S2 319 aa11.46□□□□□ -0.58
LINC01278-204ENST00000609143 HELZP42694 1942 aaKnown RBP11.46□□□□□ -0.58
LINC01278-204ENST00000609143 NRG2O14511 850 aaPredicted RBP11.45□□□□□ -0.58
LINC01278-204ENST00000609143 MT-CO1P00395 513 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 RBP1P09455 135 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 CCDC166P0CW27 439 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 ALOX15P16050 662 aaPredicted RBP11.45□□□□□ -0.58
LINC01278-204ENST00000609143 CCR2P41597 374 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 ABL2P42684 1182 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 GRIA4P48058 902 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 ELF3P78545 371 aaPredicted RBP11.45□□□□□ -0.58
LINC01278-204ENST00000609143 PLEKHG6Q3KR16 790 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 CFAP157Q5JU67 520 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 ATXN7L2Q5T6C5 722 aaPredicted RBP11.45□□□□□ -0.58
LINC01278-204ENST00000609143 C7orf61Q8IZ16 206 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 CMTM8Q8IZV2 173 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 NSL1Q96IY1 281 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 TMEM237Q96Q45 408 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 TCF12Q99081 682 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 DRC3Q9H069 523 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 ILKAPQ9H0C8 392 aaPredicted RBP11.45□□□□□ -0.58
LINC01278-204ENST00000609143 APOBEC2Q9Y235 224 aaKnown RBP11.45□□□□□ -0.58
LINC01278-204ENST00000609143 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.45□□□□□ -0.58
LINC01278-204ENST00000609143 PFDN6O15212 129 aa11.45□□□□□ -0.58
LINC01278-204ENST00000609143 STX7O15400 261 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms