RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 LVRNQ6Q4G3 990 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 LRRC69Q6ZNQ3 347 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 SLC35F3Q8IY50 421 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 NDUFAF2Q8N183 169 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 SDR16C5Q8N3Y7 309 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 PGBD5Q8N414 524 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 PLA2G15Q8NCC3 412 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 CCDC42Q96M95 316 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 CLPBQ9H078 707 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 WDR26Q9H7D7 661 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 KCTD5Q9NXV2 234 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 PADI4Q9UM07 663 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 PHTF1Q9UMS5 762 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 GPR34Q9UPC5 381 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 IGSF10Q6WRI0 2623 aa13.27□□□□□ -0.29
TOM1-218ENST00000608674 A0A087WV48 116 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 SSU72P8A0A1W2PR75 194 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 MFSD11O43934 449 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 BRINP1O60477 761 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 USP12O75317 370 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 CSO75390 466 aaKnown RBP13.26□□□□□ -0.29
TOM1-218ENST00000608674 CR2P20023 1033 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 MX2P20592 715 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 ACTN2P35609 894 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 GARSP41250 739 aaKnown RBP13.26□□□□□ -0.29
TOM1-218ENST00000608674 KIAA1024LP59773 190 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 ARHGEF7Q14155 803 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 ANKRD20A8PQ5CZ79 823 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 TIGD7Q6NT04 549 aaPredicted RBP13.26□□□□□ -0.29
TOM1-218ENST00000608674 PNCKQ6P2M8 343 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 USP45Q70EL2 814 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 ARL10Q8N8L6 244 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 OR56A4Q8NGH8 313 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 PCDH19Q8TAB3 1148 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 FAM71BQ8TC56 605 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 SPOCK2Q92563 424 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 FGF11Q92914 225 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 FUBP1Q96AE4 644 aaKnown RBP13.26□□□□□ -0.29
TOM1-218ENST00000608674 NUS1Q96E22 293 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 NSMCE3Q96MG7 304 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 ZNF670Q9BS34 389 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 ANP32EQ9BTT0 268 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 PACSIN1Q9BY11 444 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 POLR1EQ9GZS1 481 aaKnown RBP13.26□□□□□ -0.29
TOM1-218ENST00000608674 SYNDIG1Q9H7V2 258 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 SIRPGQ9P1W8 387 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 MOSPD1Q9UJG1 213 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 NENFQ9UMX5 172 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 TTLL3Q9Y4R7 772 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 PCDHB1Q9Y5F3 818 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 DGKBQ9Y6T7 804 aa13.26□□□□□ -0.29
TOM1-218ENST00000608674 GOLGA6CA6NDK9 693 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 GOLGA6BA6NDN3 693 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 TNFRSF10CO14798 259 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 MATN3O15232 486 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 HEXIM1O94992 359 aaKnown RBP13.25□□□□□ -0.29
TOM1-218ENST00000608674 PGLSO95336 258 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 CELA2BP08218 269 aaPredicted RBP13.25□□□□□ -0.29
TOM1-218ENST00000608674 HOXC4P09017 264 aaPredicted RBP13.25□□□□□ -0.29
TOM1-218ENST00000608674 TMEM253P0C7T8 217 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 GOLGA6DP0CG33 693 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 TGM2P21980 687 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 CES1P23141 567 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 MAN1A1P33908 653 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 TRIM23P36406 574 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 ABCG1P45844 678 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 ARSEP51690 589 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 EPHB1P54762 984 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 GALNT2Q10471 571 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 TRAF2Q12933 501 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 MESDQ14696 234 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 PAFAH1B3Q15102 231 aaKnown RBP13.25□□□□□ -0.29
TOM1-218ENST00000608674 CNGA3Q16281 694 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 IFI16Q16666 785 aaKnown RBP13.25□□□□□ -0.29
TOM1-218ENST00000608674 ASTE1Q2TB18 679 aaPredicted RBP13.25□□□□□ -0.29
TOM1-218ENST00000608674 NCBP2-AS2Q69YL0 99 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 CRTC1Q6UUV9 634 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 RBM44Q6ZP01 1051 aaKnown RBP13.25□□□□□ -0.29
TOM1-218ENST00000608674 TAF8Q7Z7C8 310 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 PDZD3Q86UT5 571 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 CPNE8Q86YQ8 564 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 VSTM4Q8IW00 320 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 LSMEM2Q8N112 164 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.25□□□□□ -0.29
TOM1-218ENST00000608674 TEX26Q8N6G2 289 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 RNF214Q8ND24 703 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 WDR48Q8TAF3 677 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 OR1E3Q8WZA6 343 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 GRAMD1AQ96CP6 724 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 PDXPQ96GD0 296 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 COQ10AQ96MF6 247 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 ZNF830Q96NB3 372 aaPredicted RBP13.25□□□□□ -0.29
TOM1-218ENST00000608674 SEMA3CQ99985 751 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 PHPT1Q9NRX4 125 aaPredicted RBP13.25□□□□□ -0.29
TOM1-218ENST00000608674 ABHD10Q9NUJ1 306 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 RBM22Q9NW64 420 aaKnown RBP eCLIP13.25□□□□□ -0.29
TOM1-218ENST00000608674 GOLGA6AQ9NYA3 693 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 RAI2Q9Y5P3 530 aa13.25□□□□□ -0.29
TOM1-218ENST00000608674 TMEM202A6NGA9 273 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 TLX3O43711 291 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms