RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.64□□□□□ -1.19
CUX1-219ENST00000606749 A0A1W2PQ67 120 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 A0A1W2PQM1 296 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 CACNB4O00305 520 aaPredicted RBP7.64□□□□□ -1.19
CUX1-219ENST00000606749 KLK10O43240 276 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 MAFKO60675 156 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 TNFSF15O95150 251 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 PRB1P04280 392 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 RARAP10276 462 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 PDX1P52945 283 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 UCNP55089 124 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 KIAA1024LP59773 190 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 C19orf57Q0VDD7 668 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 ACOX1Q15067 660 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 BROXQ5VW32 411 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 HGSNATQ68CP4 663 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 TXNRD3NBQ6F5E7 133 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 FOXR1Q6PIV2 292 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 PCSK4Q6UW60 755 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 TMCO3Q6UWJ1 677 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 TAF8Q7Z7C8 310 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 PELI3Q8N2H9 469 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 ARL14Q8N4G2 192 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 PAF1Q8N7H5 531 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 NIPA2Q8N8Q9 360 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 FAM46DQ8NEK8 389 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 GPR156Q8NFN8 814 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 OR6C4Q8NGE1 309 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 KCNE4Q8WWG9 221 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 HSPH1Q92598 858 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 SYN2Q92777 582 aaPredicted RBP7.64□□□□□ -1.19
CUX1-219ENST00000606749 CCDC74AQ96AQ1 378 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 PDXPQ96GD0 296 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 BTBD6Q96KE9 485 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 COQ10AQ96MF6 247 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 CSPG4P5Q96PW8 444 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 GFM1Q96RP9 751 aaKnown RBP7.64□□□□□ -1.19
CUX1-219ENST00000606749 NUDCD1Q96RS6 583 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 MGME1Q9BQP7 344 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.64□□□□□ -1.19
CUX1-219ENST00000606749 TMEM168Q9H0V1 697 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 THAP2Q9H0W7 228 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 LRRN3Q9H3W5 708 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 NOD2Q9HC29 1040 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 CPNE5Q9HCH3 593 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 MRPL40Q9NQ50 206 aaKnown RBP7.64□□□□□ -1.19
CUX1-219ENST00000606749 B4GALT6Q9UBX8 382 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 PHTF1Q9UMS5 762 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 ATRXP46100 2492 aa7.64□□□□□ -1.19
CUX1-219ENST00000606749 MGAQ8IWI9 3026 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 IGSF10Q6WRI0 2623 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 CCDC187A0A096LP49 1063 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 A0A1W2PQJ5 194 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 TMX2-CTNND1H3BSU7 103 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 PDE2AO00408 941 aaPredicted RBP7.63□□□□□ -1.19
CUX1-219ENST00000606749 NOBOXO60393 691 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 SOCS5O75159 536 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 C1QL1O75973 258 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 HEXIM1O94992 359 aaKnown RBP7.63□□□□□ -1.19
CUX1-219ENST00000606749 FUCA1P04066 466 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 CYP1A2P05177 515 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 PNLIPP16233 465 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 GLB1P16278 677 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 KELP23276 732 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 IL4RP24394 825 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 VIPR1P32241 457 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 HSPA9P38646 679 aaKnown RBP7.63□□□□□ -1.19
CUX1-219ENST00000606749 PBX1P40424 430 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 MLLT3P42568 568 aaPredicted RBP7.63□□□□□ -1.19
CUX1-219ENST00000606749 UBASH3AP57075 661 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 TMPRSS3P57727 454 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 MAXP61244 160 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 FANCCQ00597 558 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 SLC25A11Q02978 314 aaKnown RBP7.63□□□□□ -1.19
CUX1-219ENST00000606749 VAC14Q08AM6 782 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 MMRN1Q13201 1228 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 ZNF235Q14590 738 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 PTPRRQ15256 657 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 CNGA3Q16281 694 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 ARHGAP40Q5TG30 622 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 MARC1Q5VT66 337 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 HSD11B1LQ7Z5J1 315 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 B3GNT8Q7Z7M8 397 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 CLEC14AQ86T13 490 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 LUZP1Q86V48 1076 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 LRRC49Q8IUZ0 686 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 SFTPA2Q8IWL1 248 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 Q8N9G6 341 aaPredicted RBP7.63□□□□□ -1.19
CUX1-219ENST00000606749 CCL4L1Q8NHW4 92 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 PDCD6IPQ8WUM4 868 aaKnown RBP7.63□□□□□ -1.19
CUX1-219ENST00000606749 CPLX3Q8WVH0 158 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 SNRNP27Q8WVK2 155 aaKnown RBP7.63□□□□□ -1.19
CUX1-219ENST00000606749 TEKT4Q8WW24 435 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 CCDC97Q96F63 343 aaPredicted RBP7.63□□□□□ -1.19
CUX1-219ENST00000606749 LIN37Q96GY3 246 aaPredicted RBP7.63□□□□□ -1.19
CUX1-219ENST00000606749 NUP85Q9BW27 656 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 TEX101Q9BY14 249 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 FOXP3Q9BZS1 431 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 WDR26Q9H7D7 661 aa7.63□□□□□ -1.19
CUX1-219ENST00000606749 SYNDIG1Q9H7V2 258 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms