RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 TSPAN11A1L157 253 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 CFAP69A5D8W1 941 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 C2CD4BA6NLJ0 364 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 AKR1B15C9JRZ8 316 aaPredicted RBP18.62■□□□□ 0.57
NECAB3-220ENST00000606699 FTLP02792 175 aaPredicted RBP18.62■□□□□ 0.57
NECAB3-220ENST00000606699 GZMAP12544 262 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 C15orf59Q2T9L4 293 aaPredicted RBP18.62■□□□□ 0.57
NECAB3-220ENST00000606699 RAB6CQ53S08 254 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 PPP1R2P3Q6NXS1 205 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 ERAP2Q6P179 960 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 DNAJC24Q6P3W2 148 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 BRAT1Q6PJG6 821 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 DTX1Q86Y01 620 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 NTAN1Q96AB6 310 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 ZNF641Q96N77 438 aaPredicted RBP18.62■□□□□ 0.57
NECAB3-220ENST00000606699 RAB6CQ9H0N0 254 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 SUV39H2Q9H5I1 410 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 COQ6Q9Y2Z9 468 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 OR1A2Q9Y585 309 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 PCDHGA4Q9Y5G9 962 aa18.62■□□□□ 0.57
NECAB3-220ENST00000606699 BSNQ9UPA5 3926 aa18.61■□□□□ 0.57
NECAB3-220ENST00000606699 UNC13CQ8NB66 2214 aa18.61■□□□□ 0.57
NECAB3-220ENST00000606699 A0A087X0T9 212 aa18.61■□□□□ 0.57
NECAB3-220ENST00000606699 PRAMEF33A0A0G2JMD5 474 aa18.61■□□□□ 0.57
NECAB3-220ENST00000606699 TCRBV5S1A1TA0A578 114 aa18.61■□□□□ 0.57
NECAB3-220ENST00000606699 NUDT21O43809 227 aaKnown RBP18.61■□□□□ 0.57
NECAB3-220ENST00000606699 PRAMEF10O60809 474 aa18.61■□□□□ 0.57
NECAB3-220ENST00000606699 HOXC4P09017 264 aaPredicted RBP18.61■□□□□ 0.57
NECAB3-220ENST00000606699 FAM228BP0C875 321 aa18.61■□□□□ 0.57
NECAB3-220ENST00000606699 KRT3P12035 628 aa18.61■□□□□ 0.57
NECAB3-220ENST00000606699 TBR1Q16650 682 aa18.61■□□□□ 0.57
NECAB3-220ENST00000606699 TSR1Q2NL82 804 aaKnown RBP18.61■□□□□ 0.57
NECAB3-220ENST00000606699 PARP15Q460N3 678 aa18.61■□□□□ 0.57
NECAB3-220ENST00000606699 CNGA4Q8IV77 575 aa18.61■□□□□ 0.57
NECAB3-220ENST00000606699 RTL3Q8N8U3 475 aaKnown RBP18.61■□□□□ 0.57
NECAB3-220ENST00000606699 Q8N9G6 341 aaPredicted RBP18.61■□□□□ 0.57
NECAB3-220ENST00000606699 NCAPGQ9BPX3 1015 aa18.61■□□□□ 0.57
NECAB3-220ENST00000606699 TRIM4Q9C037 500 aa18.61■□□□□ 0.57
NECAB3-220ENST00000606699 NOL6Q9H6R4 1146 aaKnown RBP18.61■□□□□ 0.57
NECAB3-220ENST00000606699 PCDH12Q9NPG4 1184 aa18.61■□□□□ 0.57
NECAB3-220ENST00000606699 ZNHIT6Q9NWK9 470 aaKnown RBP18.61■□□□□ 0.57
NECAB3-220ENST00000606699 SIGLEC16A6NMB1 481 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.6■□□□□ 0.57
NECAB3-220ENST00000606699 TNFRSF10CO14798 259 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 PPFIA2O75334 1257 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 FAM87AP0C7U9 286 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 ITIH1P19827 911 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 KELP23276 732 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 RFC1P35251 1148 aaPredicted RBP18.6■□□□□ 0.57
NECAB3-220ENST00000606699 LIG3P49916 1009 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 HDAC4P56524 1084 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 KIAA1024LP59773 190 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 SRSF6Q13247 344 aaKnown RBP18.6■□□□□ 0.57
NECAB3-220ENST00000606699 SERINC3Q13530 473 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 ARHGEF7Q14155 803 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 HLTFQ14527 1009 aaKnown RBP eCLIP18.6■□□□□ 0.57
NECAB3-220ENST00000606699 C14orf28Q4W4Y0 310 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 TMEM164Q5U3C3 297 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 ZNF574Q6ZN55 896 aaPredicted RBP18.6■□□□□ 0.57
NECAB3-220ENST00000606699 SPRED1Q7Z699 444 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 TAF8Q7Z7C8 310 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 SLITRK4Q8IW52 837 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 FAM46DQ8NEK8 389 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 OR56A4Q8NGH8 313 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 USP7Q93009 1102 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 ZNF653Q96CK0 615 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 MCEEQ96PE7 176 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 MAGEB5Q9BZ81 275 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 ISCUQ9H1K1 167 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 GEMIN8Q9NWZ8 242 aaKnown RBP18.6■□□□□ 0.57
NECAB3-220ENST00000606699 AKAP7Q9P0M2 348 aaPredicted RBP18.6■□□□□ 0.57
NECAB3-220ENST00000606699 LRIT1Q9P2V4 623 aa18.6■□□□□ 0.57
NECAB3-220ENST00000606699 WASH4PA8MWX3 477 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 INSIG1O15503 277 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 EPHB2P29323 1055 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 MMP12P39900 470 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 RPL7AP62424 266 aaKnown RBP18.59■□□□□ 0.57
NECAB3-220ENST00000606699 SRSF1Q07955 248 aaKnown RBP eCLIP18.59■□□□□ 0.578e-11■■■□□ 17.5
NECAB3-220ENST00000606699 CYTH1Q15438 398 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 TCEA2Q15560 299 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 CLPPQ16740 277 aaPredicted RBP18.59■□□□□ 0.57
NECAB3-220ENST00000606699 PPP1R15BQ5SWA1 713 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 SLFN11Q7Z7L1 901 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 ZFAND4Q86XD8 727 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 UMODL1-AS1Q8N2C9 162 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 CCDC185Q8N715 623 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 TC2NQ8N9U0 490 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 FAM172AQ8WUF8 416 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 PDXPQ96GD0 296 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 TUBGCP5Q96RT8 1024 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 CHP1Q99653 195 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 KLC2Q9H0B6 622 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 SLC25A18Q9H1K4 315 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 DONSONQ9NYP3 566 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 LHX3Q9UBR4 397 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 CNOT8Q9UFF9 292 aaKnown RBP18.59■□□□□ 0.57
NECAB3-220ENST00000606699 RNF215Q9Y6U7 377 aa18.59■□□□□ 0.57
NECAB3-220ENST00000606699 C9orf172C9J069 976 aa18.58■□□□□ 0.56
NECAB3-220ENST00000606699 RASA4BC9J798 803 aa18.58■□□□□ 0.56
NECAB3-220ENST00000606699 CACNB4O00305 520 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms