RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CARSP49589 748 aaKnown RBP7.7□□□□□ -1.18
MSH6-211ENST00000606499 LIG3P49916 1009 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 SUOXP51687 545 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 PLTPP55058 493 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 ELP6Q0PNE2 266 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 SFSWAPQ12872 951 aaKnown RBP7.7□□□□□ -1.18
MSH6-211ENST00000606499 SRSF5Q13243 272 aaKnown RBP7.7□□□□□ -1.18
MSH6-211ENST00000606499 MSLNQ13421 630 aaPredicted RBP7.7□□□□□ -1.18
MSH6-211ENST00000606499 SEPT6Q14141 434 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 CNGA3Q16281 694 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 CDKN3Q16667 212 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 MSS51Q4VC12 460 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 CCDC38Q502W7 563 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 FNBP1LQ5T0N5 605 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 SEL1L3Q68CR1 1132 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 LRRC66Q68CR7 880 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 LRRC8BQ6P9F7 803 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 MICALCLQ6ZW33 695 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 GLT6D1Q7Z4J2 308 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 WDR5BQ86VZ2 330 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 NDUFAF2Q8N183 169 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 MPP5Q8N3R9 675 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 TTC30BQ8N4P2 665 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 MCUQ8NE86 351 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 FBXO25Q8TCJ0 367 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 IFT81Q8WYA0 676 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 ART4Q93070 314 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 RAB7BQ96AH8 199 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 EID2BQ96D98 161 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 TRIM56Q9BRZ2 755 aaKnown RBP7.7□□□□□ -1.18
MSH6-211ENST00000606499 LRFN3Q9BTN0 628 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 GPR174Q9BXC1 333 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 C1QTNF1Q9BXJ1 281 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 BTBD1Q9H0C5 482 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 XAB2Q9HCS7 855 aaKnown RBP7.7□□□□□ -1.18
MSH6-211ENST00000606499 ZDHHC18Q9NUE0 388 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 SYBUQ9NX95 663 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 WSB2Q9NYS7 404 aaPredicted RBP7.7□□□□□ -1.18
MSH6-211ENST00000606499 MBD1Q9UIS9 605 aaPredicted RBP7.7□□□□□ -1.18
MSH6-211ENST00000606499 FBXO4Q9UKT5 387 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 ZFR2Q9UPR6 939 aaKnown RBP7.7□□□□□ -1.18
MSH6-211ENST00000606499 COQ6Q9Y2Z9 468 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 ARL5AQ9Y689 179 aa7.7□□□□□ -1.18
MSH6-211ENST00000606499 TP53BP1Q12888 1972 aaPredicted RBP7.7□□□□□ -1.18
MSH6-211ENST00000606499 NUMA1Q14980 2115 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 CACNA1IQ9P0X4 2223 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 TBC1D3DA0A087WVF3 549 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 TBC1D3IA0A087WXS9 549 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 TBC1D3EA0A087X179 549 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 TBC1D3KA0A087X1G2 549 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 CCDC163A0A0D9SF12 145 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 A0A1W2PQU0 124 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 TBC1D3FA6NER0 549 aaPredicted RBP7.69□□□□□ -1.18
MSH6-211ENST00000606499 LRRC72A6NJI9 287 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 TBC1D3LB9A6J9 549 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 GALR2O43603 387 aaPredicted RBP7.69□□□□□ -1.18
MSH6-211ENST00000606499 TSPAN6O43657 245 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 LDB2O43679 373 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 MMP20O60882 483 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 PCDH8O95206 1070 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 C1SP09871 688 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 TBC1D3HP0C7X1 549 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 SP9P0CG40 484 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 CYP2A6P11509 494 aaPredicted RBP7.69□□□□□ -1.18
MSH6-211ENST00000606499 MLNP12872 115 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 C6P13671 934 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 GM2AP17900 193 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 ECHS1P30084 290 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 CD6P30203 668 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 OXTRP30559 389 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 MAT2AP31153 395 aaKnown RBP7.69□□□□□ -1.18
MSH6-211ENST00000606499 MAGEA3P43357 314 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 STC1P52823 247 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 DRG2P55039 364 aaKnown RBP7.69□□□□□ -1.18
MSH6-211ENST00000606499 SARNPP82979 210 aaKnown RBP7.69□□□□□ -1.18
MSH6-211ENST00000606499 CCDC15Q0P6D6 951 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 ARHGEF7Q14155 803 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 HLTFQ14527 1009 aaKnown RBP eCLIP7.69□□□□□ -1.18
MSH6-211ENST00000606499 PTPRCAPQ14761 206 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 NAA30Q147X3 362 aaPredicted RBP7.69□□□□□ -1.18
MSH6-211ENST00000606499 HIF1AQ16665 826 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 ERCC6LQ2NKX8 1250 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 BBS9Q3SYG4 887 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 TMEM52BQ4KMG9 183 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 TMEM259Q4ZIN3 620 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 USP39Q53GS9 565 aaKnown RBP7.69□□□□□ -1.18
MSH6-211ENST00000606499 HP1BP3Q5SSJ5 553 aaPredicted RBP7.69□□□□□ -1.18
MSH6-211ENST00000606499 TBC1D3GQ6DHY5 549 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 TBC1D3CQ6IPX1 549 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 LIPIQ6XZB0 460 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 RFLNAQ6ZTI6 216 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 HSD11B1LQ7Z5J1 315 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 LONP2Q86WA8 852 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 CCDC25Q86WR0 208 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 GSPT2Q8IYD1 628 aaKnown RBP7.69□□□□□ -1.18
MSH6-211ENST00000606499 TBC1D3Q8IZP1 549 aaPredicted RBP7.69□□□□□ -1.18
MSH6-211ENST00000606499 ZCCHC9Q8N567 271 aaKnown RBP7.69□□□□□ -1.18
MSH6-211ENST00000606499 DEFB119Q8N690 84 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 BBOF1Q8ND07 529 aa7.69□□□□□ -1.18
MSH6-211ENST00000606499 OR2T34Q8NGX1 318 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms