RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 KANSL2Q9H9L4 492 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 AKIP1Q9NQ31 210 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 CNGB3Q9NQW8 809 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 CNNM1Q9NRU3 951 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 TOPORSQ9NS56 1045 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 SPATA6Q9NWH7 488 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 KCND2Q9NZV8 630 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 DNMT3BQ9UBC3 853 aaKnown RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 COPG2Q9UBF2 871 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 FBXO9Q9UK97 447 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 SARDHQ9UL12 918 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF214Q9UL59 606 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 EIF3LQ9Y262 564 aaKnown RBP4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 COQ4Q9Y3A0 265 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 TESMINQ9Y4I5 508 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 COL24A1Q17RW2 1714 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 ASTN1O14525 1302 aa4.11□□□□□ -1.75
HMGB1P50-201ENST00000605814 TNRC6CQ9HCJ0 1690 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLX4Q8IY92 1834 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 ARFGEF1Q9Y6D6 1849 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 A0A1W2PPW3 197 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 C1QTNF3-AMACRE9PGA6 284 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 H0YAE9 185 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 VWA5AO00534 786 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 TRIM38O00635 465 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 HOXC11O43248 304 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 PAPSS1O43252 624 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 NOL3O60936 208 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 GPC4O75487 556 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 GMNNO75496 209 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 RNASEH2AO75792 299 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SNX4O95219 450 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 GCP02774 474 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SERPINE1P05121 402 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 JUNP05412 331 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 TRAPPC2P0DI81 140 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 TRAPPC2BP0DI82 140 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 HSPA1AP0DMV8 641 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 HSPA1BP0DMV9 641 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 MBL2P11226 248 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 RALAP11233 206 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 UNGP13051 313 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 EEF2P13639 858 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 PTPN1P18031 435 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 ENPP1P22413 925 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 TCEA1P23193 301 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 IL12AP29459 219 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SSTR1P30872 391 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 RRM2P31350 389 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 IFNA8P32881 189 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 CSTF2P33240 577 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 THBS2P35442 1172 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 IDUAP35475 653 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 BMPR1AP36894 532 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 HPCAL1P37235 193 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 ECE1P42892 770 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 MAGEA6P43360 314 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 PRIM2P49643 509 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC26A2P50443 739 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 ARSEP51690 589 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 AP2S1P53680 142 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 IST1P53990 364 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 PRKAA2P54646 552 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 ALDH18A1P54886 795 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 NAPAP54920 295 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 MFAP3P55082 362 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 RAD51Q06609 339 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 PPP3CAQ08209 521 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 NIPAL4Q0D2K0 466 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 FCHO2Q0JRZ9 810 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 FSTL1Q12841 308 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 BFSP1Q12934 665 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 PMS2P3Q13401 168 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 MAMLD1Q13495 774 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC12A1Q13621 1099 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 ALCAMQ13740 583 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 TFDP1Q14186 410 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 TRIM25Q14258 630 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 GALNT3Q14435 633 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 RAB39AQ14964 217 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 NPTX1Q15818 432 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 FXNQ16595 210 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 TAZQ16635 292 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 INAVAQ3KP66 663 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 LRIT3Q3SXY7 679 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC36A3Q495N2 470 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 AARS2Q5JTZ9 985 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF484Q5JVG2 852 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 CES4AQ5XG92 561 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 UGT3A1Q6NUS8 523 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 FAM122CQ6P4D5 195 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SYCE2Q6PIF2 218 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 TRIM72Q6ZMU5 477 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 PLEKHG7Q6ZR37 379 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 FRMD7Q6ZUT3 714 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 DENND5BQ6ZUT9 1274 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 FKBP9P1Q75LS8 142 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 ENOSF1Q7L5Y1 443 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SPRED1Q7Z699 444 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms