RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 HADHAP40939 763 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 ATP1A2P50993 1020 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 TMPRSS15P98073 1019 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 DNAJC3Q13217 504 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 ARSIQ5FYB1 569 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 MROH9Q5TGP6 573 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 USP45Q70EL2 814 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 Q7L0L9 218 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 OTUD6BQ8N6M0 293 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 OR4K2Q8NGD2 314 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 OR13C4Q8NGS5 318 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 VOPP1Q96AW1 172 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 TBATAQ96M53 351 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 KLHL32Q96NJ5 620 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 SMIM14Q96QK8 99 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 P2RY13Q9BPV8 354 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 KCNK12Q9HB15 430 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 KCNK9Q9NPC2 374 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 TRPV5Q9NQA5 729 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 THAP10Q9P2Z0 257 aaPredicted RBP18.04■□□□□ 0.48
VRK3-225ENST00000601912 PKP3Q9Y446 797 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 WASF2Q9Y6W5 498 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 COL4A3Q01955 1670 aa18.04■□□□□ 0.48
VRK3-225ENST00000601912 A0A1W2PPM1 405 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 CAPN8A6NHC0 703 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 ALPIP09923 528 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 KRT4P19013 534 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 HMGCLP35914 325 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 SOX9P48436 509 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 GALK1P51570 392 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 ARSDP51689 593 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 ZNF470Q6ECI4 717 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 KIAA0408Q6ZU52 694 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 PTAR1Q7Z6K3 402 aaPredicted RBP18.03■□□□□ 0.48
VRK3-225ENST00000601912 SFTPA1Q8IWL2 248 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 TTC30BQ8N4P2 665 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 ZNF366Q8N895 744 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 HCAR2Q8TDS4 363 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 ALKBH8Q96BT7 664 aaKnown RBP18.03■□□□□ 0.48
VRK3-225ENST00000601912 SCRN2Q96FV2 425 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 CDKN2AIPNLQ96HQ2 116 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 RBBP8Q99708 897 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 TMEM245Q9H330 911 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 MTG2Q9H4K7 406 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 ZFYVE1Q9HBF4 777 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 SUN2Q9UH99 717 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 ADAM21Q9UKJ8 722 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 PPIL1Q9Y3C6 166 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 PRNPP04156 253 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 ITGA2BP08514 1039 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 PSMA3P25788 255 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 HNF1BP35680 557 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 TNFRSF4P43489 277 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 BMPR2Q13873 1038 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 PTPRCAPQ14761 206 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 MRNIPQ6NTE8 343 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 ZSWIM9Q86XI8 627 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 SLC44A3Q8N4M1 653 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 C2CD4AQ8NCU7 369 aaPredicted RBP18.03■□□□□ 0.48
VRK3-225ENST00000601912 OR8D1Q8WZ84 308 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 LYSMD1Q96S90 227 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 GGT7Q9UJ14 662 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 FBXO5Q9UKT4 447 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 STARD13Q9Y3M8 1113 aa18.03■□□□□ 0.48
VRK3-225ENST00000601912 C1orf232A0A0U1RR37 186 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 CCL22O00626 93 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 NPC1O15118 1278 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 GOT2P00505 430 aaKnown RBP18.02■□□□□ 0.47
VRK3-225ENST00000601912 HLA-EP13747 358 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 LIMK2P53671 638 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 CTBP1Q13363 440 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 ELAVL3Q14576 367 aaKnown RBP18.02■□□□□ 0.47
VRK3-225ENST00000601912 SMAD2Q15796 467 aaKnown RBP18.02■□□□□ 0.47
VRK3-225ENST00000601912 ZNF805Q5CZA5 627 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 C9orf64Q5T6V5 341 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 AFTPHQ6ULP2 937 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 TIFABQ6ZNK6 161 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 TPRG1Q6ZUI0 275 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 LYSMD3Q7Z3D4 306 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 DENND6AQ8IWF6 608 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 C4orf33Q8N1A6 199 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 OR4L1Q8NH43 312 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 C19orf43Q9BQ61 176 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 C8orf33Q9H7E9 229 aaPredicted RBP18.02■□□□□ 0.47
VRK3-225ENST00000601912 SSU72Q9NP77 194 aaKnown RBP18.02■□□□□ 0.47
VRK3-225ENST00000601912 POLR3BQ9NW08 1133 aaPredicted RBP18.02■□□□□ 0.47
VRK3-225ENST00000601912 DKK3Q9UBP4 350 aa18.02■□□□□ 0.47
VRK3-225ENST00000601912 SMG5Q9UPR3 1016 aaKnown RBP18.02■□□□□ 0.47
VRK3-225ENST00000601912 TMEM120BA0PK00 339 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 CCDC162PA2VCL2 907 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 A6NNZ2 444 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 SPECC1L-ADORA2AF8WAN1 911 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 RRP9O43818 475 aaKnown RBP18.01■□□□□ 0.47
VRK3-225ENST00000601912 CTSLP07711 333 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 CREB1P16220 341 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 XPAP23025 273 aaPredicted RBP18.01■□□□□ 0.47
VRK3-225ENST00000601912 CTHP32929 405 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 SLC1A2P43004 574 aa18.01■□□□□ 0.47
VRK3-225ENST00000601912 ILF2Q12905 390 aaKnown RBP18.01■□□□□ 0.47
VRK3-225ENST00000601912 PTPRRQ15256 657 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms