RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 CDH4P55283 916 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 DEFB103AP81534 67 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 LRRC74AQ0VAA2 488 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 HDDC3Q8N4P3 179 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 ZNF229Q9UJW7 825 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 GJA8P48165 433 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 CDK7P50613 346 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 PTP4A2Q12974 167 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 UPP1Q16831 310 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 VITQ6UXI7 678 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 TMEM130Q8N3G9 435 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 MYO19Q96H55 970 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 CDH19Q9H159 772 aa11.1□□□□□ -0.63
ZNF558-207ENST00000601372 MYO5AQ9Y4I1 1855 aaKnown RBP11.1□□□□□ -0.63
ZNF558-207ENST00000601372 DYRK3O43781 588 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 RASGRP1O95267 797 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 TMEM109Q9BVC6 243 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 GKN1Q9NS71 199 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 BTRCQ9Y297 605 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 ETS2P15036 469 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 WDR5P61964 334 aaKnown RBP11.09□□□□□ -0.63
ZNF558-207ENST00000601372 LRRC32Q14392 662 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 PCID2Q5JVF3 399 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 UBAP2Q5T6F2 1119 aaKnown RBP11.09□□□□□ -0.63
ZNF558-207ENST00000601372 STRADAQ7RTN6 431 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 SMG8Q8ND04 991 aaKnown RBP11.09□□□□□ -0.63
ZNF558-207ENST00000601372 BPIFB1Q8TDL5 484 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 RCN3Q96D15 328 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 FERD3LQ96RJ6 166 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 WDR55Q9H6Y2 383 aaPredicted RBP11.09□□□□□ -0.63
ZNF558-207ENST00000601372 PRDM16Q9HAZ2 1276 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.09□□□□□ -0.63
ZNF558-207ENST00000601372 EIF3LQ9Y262 564 aaKnown RBP11.09□□□□□ -0.63
ZNF558-207ENST00000601372 WNT6Q9Y6F9 365 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 PAPPA2Q9BXP8 1791 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 ZSCAN9O15535 394 aaPredicted RBP11.09□□□□□ -0.63
ZNF558-207ENST00000601372 PGM3O95394 542 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 PIGRP01833 764 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 SLC2A4P14672 509 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 GNSP15586 552 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 ME2P23368 584 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 OGDHQ02218 1023 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 GRM3Q14832 879 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 PFKFB4Q16877 469 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 PARP15Q460N3 678 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 ATP6AP1LQ52LC2 224 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 OTUD3Q5T2D3 398 aaPredicted RBP11.09□□□□□ -0.63
ZNF558-207ENST00000601372 DEFB119Q8N690 84 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 CYB5D2Q8WUJ1 264 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 PANX3Q96QZ0 392 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 CCSER2Q9H7U1 834 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 FCF1Q9Y324 198 aaKnown RBP11.09□□□□□ -0.63
ZNF558-207ENST00000601372 KCNU1A8MYU2 1149 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 ALOX15P16050 662 aaPredicted RBP11.09□□□□□ -0.63
ZNF558-207ENST00000601372 TSHRP16473 764 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 NELFEP18615 380 aaKnown RBP11.09□□□□□ -0.63
ZNF558-207ENST00000601372 RFX3P48380 749 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 CRTC3Q6UUV7 619 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 RIN3Q8TB24 985 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 OTULINQ96BN8 352 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 BCO2Q9BYV7 579 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 LRRC72A6NJI9 287 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 GRXCR1A8MXD5 290 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 BIRC5O15392 142 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 LRPAP1P30533 357 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 CRHR1P34998 444 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 AIF1P55008 147 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 KRT72Q14CN4 511 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 PLD3Q8IV08 490 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 FNDC5Q8NAU1 212 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 RBM15BQ8NDT2 890 aaKnown RBP11.09□□□□□ -0.63
ZNF558-207ENST00000601372 EBF3Q9H4W6 596 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 SYTL2Q9HCH5 934 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 SELENONQ9NZV5 590 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 CCDC154A6NI56 674 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 BTN3A1O00481 513 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 HCRTO43612 131 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 CPSF4O95639 269 aaKnown RBP11.09□□□□□ -0.63
ZNF558-207ENST00000601372 ATP6V1C1P21283 382 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 ARMCX6Q7L4S7 300 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 DHDDSQ86SQ9 333 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 ZNF398Q8TD17 642 aa11.09□□□□□ -0.63
ZNF558-207ENST00000601372 DENND2DQ9H6A0 471 aaPredicted RBP11.09□□□□□ -0.63
ZNF558-207ENST00000601372 TMEM63AO94886 807 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 PRNPP04156 253 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 DAOAP59103 153 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 SCIMPQ6UWF3 145 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 CLEC20AQ6ZU45 233 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 FBXO39Q8N4B4 442 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 KLK6Q92876 244 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 A0A1B0GVM2 712 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 KANSL1LA0AUZ9 987 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 TCAF2A6NFQ2 919 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 C9IYK1 514 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 C5orf58C9J3I9 102 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 CCNG1P51959 295 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 WDR4P57081 412 aaKnown RBP11.08□□□□□ -0.64
ZNF558-207ENST00000601372 ZNF460Q14592 562 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 TMCO5AQ8N6Q1 288 aa11.08□□□□□ -0.64
ZNF558-207ENST00000601372 TRPV1Q8NER1 839 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms