RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	UBQLN1	Q9UMX0	589 aa	Known RBP	11.78	□□□□□ -0.52
U2AF1L4-221	ENST00000601236	PCDHB3	Q9Y5E6	796 aa		11.78	□□□□□ -0.52
U2AF1L4-221	ENST00000601236	DOCK1	Q14185	1865 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SOWAHB	A6NEL2	793 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RGS13	O14921	159 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SLC7A4	O43246	635 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	KDM1A	O60341	852 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	UGT2B11	O75310	529 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SLC25A27	O95847	323 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CHEK2	O96017	543 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RAP2A	P10114	183 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CD9	P21926	228 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	GABRB3	P28472	473 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RAP1GAP	P47736	663 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ARCN1	P48444	511 aa	Known RBP	11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SULT1E1	P49888	294 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ERF	P50548	548 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ZNF280A	P59817	542 aa	Predicted RBP	11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TPI1	P60174	286 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	HERVK_113	P63132	956 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	MTMR2	Q13614	643 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	DAG1	Q14118	895 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SLC10A6	Q3KNW5	377 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	FAM98B	Q52LJ0	330 aa	Known RBP	11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TXNDC11	Q6PKC3	985 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	BLOC1S3	Q6QNY0	202 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	GK5	Q6ZS86	529 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RNF165	Q6ZSG1	346 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SLC15A3	Q8IY34	581 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TMCO5A	Q8N6Q1	288 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TOP6BL	Q8N6T0	577 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CCNYL1	Q8N7R7	359 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SHKBP1	Q8TBC3	707 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	BPIFB1	Q8TDL5	484 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TRIB2	Q92519	343 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	FCGR1B	Q92637	280 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	C18orf25	Q96B23	403 aa	Predicted RBP	11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TAMM41	Q96BW9	452 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	LRRC58	Q96CX6	371 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SH3YL1	Q96HL8	342 aa	Predicted RBP	11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CPB2	Q96IY4	423 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	DACH2	Q96NX9	599 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RBM4B	Q9BQ04	359 aa	Known RBP	11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RBM4	Q9BWF3	364 aa	Known RBP	11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	C1QTNF3	Q9BXJ4	246 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ERVK-6	Q9BXR3	956 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	LRRC3	Q9BY71	257 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TMEM39B	Q9GZU3	492 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	MAGIX	Q9H6Y5	334 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CNGB3	Q9NQW8	809 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	GPATCH2L	Q9NWQ4	482 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	THG1L	Q9NWX6	298 aa	Known RBP	11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ERAP1	Q9NZ08	941 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	C3orf18	Q9UK00	162 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CDC14A	Q9UNH5	594 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CLEC11A	Q9Y240	323 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PCDHA9	Q9Y5H5	950 aa		11.77	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RALGAPA2	Q2PPJ7	1873 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236		A0A0J9YYE9	177 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236		A0A1W2PPW3	197 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CLRN2	A0PK11	232 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CCDC154	A6NI56	674 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TBKBP1	A7MCY6	615 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	YDJC	A8MPS7	323 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ARNTL	O00327	626 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	GABRD	O14764	452 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ARPC2	O15144	300 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	AQP9	O43315	295 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CA12	O43570	354 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TIPRL	O75663	272 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	GABARAP	O95166	117 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SNX4	O95219	450 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	AHSG	P02765	367 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	FUCA1	P04066	466 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CPB1	P15086	417 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TFE3	P19532	575 aa	Predicted RBP	11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CRHBP	P24387	322 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	EIF2B2	P49770	351 aa	Known RBP	11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RAD23A	P54725	363 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	KCNK10	P57789	538 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	PRAME	P78395	509 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RCAN2	Q14206	197 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SELPLG	Q14242	412 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	RPS6KA2	Q15349	733 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ZBTB6	Q15916	424 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ZNF181	Q2M3W8	571 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236		Q3C1V9	767 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CELF3	Q5SZQ8	465 aa	Known RBP	11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	ZNF618	Q5T7W0	954 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	THOC7	Q6I9Y2	204 aa	Known RBP	11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	SCUBE3	Q8IX30	993 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	FAM9C	Q8IZT9	166 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	LINC01465	Q8N7H1	131 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	KCTD4	Q8WVF5	259 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	CYGB	Q8WWM9	190 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	DPF3	Q92784	378 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	MUL1	Q969V5	352 aa		11.76	□□□□□ -0.53
U2AF1L4-221	ENST00000601236	TXNDC15	Q96J42	360 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms