RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 IL1R2P27930 398 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 HSPA9P38646 679 aaKnown RBP17.05■□□□□ 0.32
SCAF1-204ENST00000601038 ARL4AP40617 200 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 DPYSL2Q16555 572 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 FOXR1Q6PIV2 292 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 OGFOD3Q6PK18 319 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 POLNQ7Z5Q5 900 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 CLEC14AQ86T13 490 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 GPR156Q8NFN8 814 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 SNRNP27Q8WVK2 155 aaKnown RBP17.05■□□□□ 0.32
SCAF1-204ENST00000601038 OR1E3Q8WZA6 343 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 GFM1Q96RP9 751 aaKnown RBP17.05■□□□□ 0.32
SCAF1-204ENST00000601038 FGF22Q9HCT0 170 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 MYO1AQ9UBC5 1043 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 BPTFQ12830 3046 aa17.05■□□□□ 0.32
SCAF1-204ENST00000601038 A0A1W2PQM1 296 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 PMS2P1A4D2B8 440 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 A8MX80 341 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 PDE2AO00408 941 aaPredicted RBP17.04■□□□□ 0.32
SCAF1-204ENST00000601038 HTRA2O43464 458 aaPredicted RBP17.04■□□□□ 0.32
SCAF1-204ENST00000601038 ITGA2BP08514 1039 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 AMPD1P23109 780 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 ZNF165P49910 485 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 CCL7P80098 99 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 RHDQ02161 417 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 EIF3IQ13347 325 aaKnown RBP17.04■□□□□ 0.32
SCAF1-204ENST00000601038 ZNF235Q14590 738 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 NR1I3Q14994 352 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 ACOX1Q15067 660 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 FIGNQ5HY92 759 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 ARHGAP40Q5TG30 622 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 PNCKQ6P2M8 343 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 PCSK4Q6UW60 755 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 TMCO3Q6UWJ1 677 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 TAF8Q7Z7C8 310 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 WBP1Q96G27 269 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 LRRN3Q9H3W5 708 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 MRPL40Q9NQ50 206 aaKnown RBP17.04■□□□□ 0.32
SCAF1-204ENST00000601038 B4GALT6Q9UBX8 382 aa17.04■□□□□ 0.32
SCAF1-204ENST00000601038 TTC24A2A3L6 582 aaPredicted RBP17.03■□□□□ 0.32
SCAF1-204ENST00000601038 D6RAR5 112 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 PLD2O14939 933 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 SOCS5O75159 536 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 PEX11BO96011 259 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 RPLP0P05388 317 aaKnown RBP17.03■□□□□ 0.32
SCAF1-204ENST00000601038 PNLIPP16233 465 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 GLB1P16278 677 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 CR2P20023 1033 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 VAC14Q08AM6 782 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 PIGHQ14442 188 aaPredicted RBP17.03■□□□□ 0.32
SCAF1-204ENST00000601038 SMTNL2Q2TAL5 461 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 B3GNT8Q7Z7M8 397 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 FAM46DQ8NEK8 389 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 COQ10AQ96MF6 247 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 TMEM74Q96NL1 305 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 CSPG4P5Q96PW8 444 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 NUDCD1Q96RS6 583 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 LGR4Q9BXB1 951 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 STRADBQ9C0K7 418 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 TMEM168Q9H0V1 697 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 WDR26Q9H7D7 661 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 ETNK2Q9NVF9 386 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 KCTD5Q9NXV2 234 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 APPL1Q9UKG1 709 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 PCDHGC4Q9Y5F7 938 aa17.03■□□□□ 0.32
SCAF1-204ENST00000601038 UNC13CQ8NB66 2214 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 NOBOXO60393 691 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 MAFKO60675 156 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 SERPINC1P01008 464 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 RARAP10276 462 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 TCF4P15884 667 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 NFKBIAP25963 317 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 CCKBRP32239 447 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 INHBCP55103 352 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 TSR1Q2NL82 804 aaKnown RBP17.02■□□□□ 0.32
SCAF1-204ENST00000601038 TAF1BQ53T94 588 aaPredicted RBP17.02■□□□□ 0.32
SCAF1-204ENST00000601038 RALGPS1Q5JS13 557 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 CERCAMQ5T4B2 595 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 RAB11FIP2Q7L804 512 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 CCNJLQ8IV13 435 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 PELI3Q8N2H9 469 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 CBARPQ8N350 705 aaPredicted RBP17.02■□□□□ 0.32
SCAF1-204ENST00000601038 BBS5Q8N3I7 341 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 PGBD5Q8N414 524 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 FBXO39Q8N4B4 442 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 TEKT4Q8WW24 435 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 HSPH1Q92598 858 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 MGME1Q9BQP7 344 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 FOXP3Q9BZS1 431 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 NOD2Q9HC29 1040 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 EPB41L5Q9HCM4 733 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 CYP4F12Q9HCS2 524 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.02■□□□□ 0.32
SCAF1-204ENST00000601038 PHTF1Q9UMS5 762 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 PCDHGA7Q9Y5G6 932 aa17.02■□□□□ 0.32
SCAF1-204ENST00000601038 BZW2Q9Y6E2 419 aaKnown RBP17.02■□□□□ 0.32
SCAF1-204ENST00000601038 PRSS38A1L453 326 aa17.01■□□□□ 0.31
SCAF1-204ENST00000601038 HEXIM1O94992 359 aaKnown RBP17.01■□□□□ 0.31
SCAF1-204ENST00000601038 MYCLP1P12525 358 aaPredicted RBP17.01■□□□□ 0.31
SCAF1-204ENST00000601038 VIPR1P32241 457 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms