RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 CEACAM1P13688 526 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 GABRG2P18507 467 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 ITIH2P19823 946 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 CSRP1P21291 193 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 NFKBIAP25963 317 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 SLC8A1P32418 973 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 ADCY8P40145 1251 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 GRIA4P48058 902 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 TRIP13Q15645 432 aaPredicted RBP11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 ARMC12Q5T9G4 340 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 RNASEH2BQ5TBB1 312 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 MMAAQ8IVH4 418 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 PPIL6Q8IXY8 311 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 RAVER1Q8IY67 606 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 NAT8LQ8N9F0 302 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 OR6K2Q8NGY2 324 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 RLN3Q8WXF3 142 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 PRCCQ92733 491 aaPredicted RBP11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 SIPA1Q96FS4 1042 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 SNF8Q96H20 258 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 KLHL32Q96NJ5 620 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 C19orf43Q9BQ61 176 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 LRRC1Q9BTT6 524 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 PABPC3Q9H361 631 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 RRAGDQ9NQL2 400 aaPredicted RBP11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 FSCN3Q9NQT6 498 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 USP36Q9P275 1121 aaKnown RBP11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 FZD4Q9ULV1 537 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 PHTF1Q9UMS5 762 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 SHOC2Q9UQ13 582 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 PCDHGC4Q9Y5F7 938 aa11.71□□□□□ -0.53
CHMP2A-207ENST00000600804 APC2O95996 2303 aa11.71□□□□□ -0.54
CHMP2A-207ENST00000600804 ACACAQ13085 2346 aa11.71□□□□□ -0.54
CHMP2A-207ENST00000600804 TTC24A2A3L6 582 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 UPK3BL1B0FP48 263 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 ANKRD66B4E2M5 251 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 C10orf142B7Z368 130 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 UPK3BL2E5RIL1 263 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 TP73O15350 636 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 AP1G1O43747 822 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 HYAL3O43820 417 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 BNIP3LO60238 219 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 PMPCBO75439 489 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 PIGNO95427 931 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 APRTP07741 180 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 ATXN1LP0C7T5 689 aaKnown RBP11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 NDUFV2P19404 249 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 GKP32189 559 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 DRD3P35462 400 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 PTGER3P43115 390 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 TNNT3P45378 269 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 DHPSP49366 369 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 NEK3P51956 506 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 BASP1P80723 227 aaKnown RBP11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 SARNPP82979 210 aaKnown RBP11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 CAV1Q03135 178 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 SLC1A5Q15758 541 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 UGP2Q16851 508 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 TTC31Q49AM3 519 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 DENND5AQ6IQ26 1287 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 HIBCHQ6NVY1 386 aaPredicted RBP11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 ERN2Q76MJ5 926 aaKnown RBP11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 ARMCX6Q7L4S7 300 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 CYP2U1Q7Z449 544 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 NDUFAF2Q8N183 169 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 PDCD7Q8N8D1 485 aaKnown RBP11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 EIF1ADQ8N9N8 165 aaKnown RBP11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 GRIN3AQ8TCU5 1115 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 PIGKQ92643 395 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 ARRDC3Q96B67 414 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 IFT43Q96FT9 208 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 SCRN2Q96FV2 425 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 TBL1YQ9BQ87 522 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 TRIM51Q9BSJ1 452 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 FSD1LQ9BXM9 530 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 PHACTR1Q9C0D0 580 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 KDM4CQ9H3R0 1056 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 CASS4Q9NQ75 786 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 ITM2CQ9NQX7 267 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 DYRK4Q9NR20 520 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 KLK13Q9UKR3 277 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 PCDHB9Q9Y5E1 797 aa11.7□□□□□ -0.54
CHMP2A-207ENST00000600804 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 A0A0J9YYE9 177 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 E7EVH7 732 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 TAF4O00268 1085 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 KPNA3O00505 521 aaPredicted RBP11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 AREL1O15033 823 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 MID1O15344 667 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 ZNF217O75362 1048 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 HEXIM1O94992 359 aaKnown RBP11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 TRBC1P01850 177 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 DNTTP04053 509 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 CAPNS1P04632 268 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 PDHA1P08559 390 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 ADRB3P13945 408 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 TIMP2P16035 220 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 OXTRP30559 389 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 P2RY2P41231 377 aa11.69□□□□□ -0.54
CHMP2A-207ENST00000600804 MAGEA3P43357 314 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms