RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 AP1B1Q10567 949 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 ZBTB17Q13105 803 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 SLC14A2Q15849 920 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 ARMC12Q5T9G4 340 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 GLRX5Q86SX6 157 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 CCDC50Q8IVM0 306 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 CNTD1Q8N815 330 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 P3H4Q92791 437 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 MYOCQ99972 504 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 TRIM10Q9UDY6 481 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 AMFRQ9UKV5 643 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 PCOLCE2Q9UKZ9 415 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 RPL26L1Q9UNX3 145 aaKnown RBP16.25■□□□□ 0.19
LSM4-206ENST00000600289 PCDHB9Q9Y5E1 797 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 RAI2Q9Y5P3 530 aa16.25■□□□□ 0.19
LSM4-206ENST00000600289 SCN8AQ9UQD0 1980 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 A0A0U1RQJ8 604 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 SPAARA0A1B0GVQ0 90 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 EIF4E1BA6NMX2 242 aaKnown RBP16.24■□□□□ 0.19
LSM4-206ENST00000600289 HACD1B0YJ81 288 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 PSMD11O00231 422 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 KCNK3O14649 394 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 MTSS1O43312 755 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 KRT86O43790 486 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 SH3BP5O60239 455 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 NEBLO76041 1014 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 JCHAINP01591 159 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 IGFALSP35858 605 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 GRK6P43250 576 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 DSC2Q02487 901 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 ITKQ08881 620 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 NIPAL4Q0D2K0 466 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 XRCC4Q13426 336 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 IHHQ14623 411 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 INAVAQ3KP66 663 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 LIPIQ6XZB0 460 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 Q6ZSR6 202 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 KANSL1Q7Z3B3 1105 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 PEX26Q7Z412 305 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 PTAR1Q7Z6K3 402 aaPredicted RBP16.24■□□□□ 0.19
LSM4-206ENST00000600289 CBARPQ8N350 705 aaPredicted RBP16.24■□□□□ 0.19
LSM4-206ENST00000600289 SAP25Q8TEE9 199 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 LRRN4Q8WUT4 740 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 TFB1MQ8WVM0 346 aaKnown RBP16.24■□□□□ 0.19
LSM4-206ENST00000600289 PIH1D2Q8WWB5 315 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 ALG3Q92685 438 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 SCRN2Q96FV2 425 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 KCTD5Q9NXV2 234 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 B4GALT6Q9UBX8 382 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 CAPN6Q9Y6Q1 641 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 CABIN1Q9Y6J0 2220 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 KNL1Q8NG31 2342 aa16.24■□□□□ 0.19
LSM4-206ENST00000600289 SPTY2D1-AS1A0A0U1RR47 76 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 GOLGA6L3A6NEY3 463 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 C1QL1O75973 258 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 PRKCGP05129 697 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 MMP2P08253 660 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 ELFN1P0C7U0 828 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 CYP2A6P11509 494 aaPredicted RBP16.23■□□□□ 0.19
LSM4-206ENST00000600289 VIPR1P32241 457 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 CETN2P41208 172 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 FAM193AP78312 1265 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 CCZ1BP86790 482 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 CCZ1P86791 482 aaPredicted RBP16.23■□□□□ 0.19
LSM4-206ENST00000600289 LRRC14Q15048 493 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 TEX44Q53QW1 395 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 KAZNQ674X7 775 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 USP45Q70EL2 814 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 RAVER1Q8IY67 606 aaKnown RBP16.23■□□□□ 0.19
LSM4-206ENST00000600289 NDUFAF2Q8N183 169 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 UBL4BQ8N7F7 174 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 PAF1Q8N7H5 531 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 PDCD6IPQ8WUM4 868 aaKnown RBP16.23■□□□□ 0.19
LSM4-206ENST00000600289 TADA1Q96BN2 335 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 IMP4Q96G21 291 aaKnown RBP16.23■□□□□ 0.19
LSM4-206ENST00000600289 HES6Q96HZ4 224 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 QKIQ96PU8 341 aaKnown RBP eCLIP16.23■□□□□ 0.19
LSM4-206ENST00000600289 OSBPL8Q9BZF1 889 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 SLC25A51Q9H1U9 297 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 SAE1Q9UBE0 346 aaPredicted RBP16.23■□□□□ 0.19
LSM4-206ENST00000600289 DNPEPQ9ULA0 475 aa16.23■□□□□ 0.19
LSM4-206ENST00000600289 TDRD6O60522 2096 aaKnown RBP16.23■□□□□ 0.19
LSM4-206ENST00000600289 ASXL3Q9C0F0 2248 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 A0A0J9YYE9 177 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 DDX3YO15523 660 aaKnown RBP16.22■□□□□ 0.19
LSM4-206ENST00000600289 NRDCO43847 1150 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 HEXIM1O94992 359 aaKnown RBP16.22■□□□□ 0.19
LSM4-206ENST00000600289 TRBC1P01850 177 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 PRB1P04280 392 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 PDHA1P08559 390 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 CCDC175P0C221 793 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 GM2AP17900 193 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 SKOR1P84550 965 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 MTM1Q13496 603 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 NOMO1Q15155 1222 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 IRF4Q15306 451 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 CNGA3Q16281 694 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 WSCD2Q2TBF2 565 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 PARGQ86W56 976 aa16.22■□□□□ 0.19
LSM4-206ENST00000600289 CHCHD4Q8N4Q1 142 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms