RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 TADA1Q96BN2 335 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 SCRN2Q96FV2 425 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 ALS2CR12Q96Q35 445 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 MCCC1Q96RQ3 725 aaPredicted RBP15.26■□□□□ 0.03
LIG1-219ENST00000600055 C1QTNF7Q9BXJ2 289 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 UBP1Q9NZI7 540 aa15.26■□□□□ 0.03
LIG1-219ENST00000600055 KLHL8Q9P2G9 620 aaPredicted RBP15.26■□□□□ 0.03
LIG1-219ENST00000600055 A0A0J9YYE9 177 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 CFAP69A5D8W1 941 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 MTSS1O43312 755 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 KCNK5O95279 499 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 TRBC1P01850 177 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 PCCBP05166 539 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 PFN3P60673 137 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 GALNT3Q14435 633 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 AGERQ15109 404 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 PCSK7Q16549 785 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 QPCTQ16769 361 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 ZNF542PQ5EBM4 170 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 PPM1JQ5JR12 505 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 PSAPL1Q6NUJ1 521 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 DARS2Q6PI48 645 aaKnown RBP15.25■□□□□ 0.03
LIG1-219ENST00000600055 CRTC1Q6UUV9 634 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 RFLNAQ6ZTI6 216 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 USP45Q70EL2 814 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 HSD11B1LQ7Z5J1 315 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 CDKL3Q8IVW4 592 aaPredicted RBP15.25■□□□□ 0.03
LIG1-219ENST00000600055 REXO1L1PQ8IX06 675 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 PLA2G15Q8NCC3 412 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 COQ10AQ96MF6 247 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 TRIB3Q96RU7 358 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 ERVMER34-1Q9H9K5 563 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 GPR27Q9NS67 375 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 BTBD3Q9Y2F9 522 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 DNAH14Q0VDD8 3507 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 CEP250Q9BV73 2442 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 CACNA1EQ15878 2313 aa15.25■□□□□ 0.03
LIG1-219ENST00000600055 GOLGA6L9A6NEM1 432 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 DFNA5O60443 496 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 SDC3O75056 442 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 PMPCBO75439 489 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 CA4P22748 312 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 ETV3P41162 512 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 RABIFP47224 123 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 RXRGP48443 463 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 NOVA1P51513 510 aaKnown RBP15.24■□□□□ 0.03
LIG1-219ENST00000600055 PDE1CQ14123 709 aaPredicted RBP15.24■□□□□ 0.03
LIG1-219ENST00000600055 FZD2Q14332 565 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 INPP5AQ14642 412 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 SEL1L2Q5TEA6 688 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 LRRC66Q68CR7 880 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 DBX2Q6ZNG2 339 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 NAXDQ8IW45 347 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 NDUFAF2Q8N183 169 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 PELI3Q8N2H9 469 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 CBARPQ8N350 705 aaPredicted RBP15.24■□□□□ 0.03
LIG1-219ENST00000600055 TRIM58Q8NG06 486 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 FAM174AQ8TBP5 190 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 SETD7Q8WTS6 366 aaKnown RBP15.24■□□□□ 0.03
LIG1-219ENST00000600055 TLR10Q9BXR5 811 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 USP29Q9HBJ7 922 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 TRMT1Q9NXH9 659 aaKnown RBP15.24■□□□□ 0.03
LIG1-219ENST00000600055 PCDHGB2Q9Y5G2 931 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 TMEM131Q92545 1883 aa15.24■□□□□ 0.03
LIG1-219ENST00000600055 CAPN8A6NHC0 703 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 KCNN4O15554 427 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 PCDHGA12O60330 932 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 CLDN7O95471 211 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 C1SP09871 688 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 CSRP1P21291 193 aaKnown RBP15.23■□□□□ 0.03
LIG1-219ENST00000600055 NFKBIAP25963 317 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 EPHA8P29322 1005 aaPredicted RBP15.23■□□□□ 0.03
LIG1-219ENST00000600055 ARRB1P49407 418 aaPredicted RBP15.23■□□□□ 0.03
LIG1-219ENST00000600055 RPL26P61254 145 aaKnown RBP15.23■□□□□ 0.03
LIG1-219ENST00000600055 PTSQ03393 145 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 CDK18Q07002 472 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 ARHGEF7Q14155 803 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 KDELC1Q6UW63 502 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 NYAP1Q6ZVC0 841 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 Q6ZVL8 140 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 SLC13A5Q86YT5 568 aaPredicted RBP15.23■□□□□ 0.03
LIG1-219ENST00000600055 DCP2Q8IU60 420 aaKnown RBP15.23■□□□□ 0.03
LIG1-219ENST00000600055 SAP25Q8TEE9 199 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 ATG4AQ8WYN0 398 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 NUS1Q96E22 293 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 OXNAD1Q96HP4 312 aaPredicted RBP15.23■□□□□ 0.03
LIG1-219ENST00000600055 FCRL5Q96RD9 977 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 VAT1Q99536 393 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 MLPHQ9BV36 600 aaPredicted RBP15.23■□□□□ 0.03
LIG1-219ENST00000600055 FAM153AQ9UHL3 310 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 RSPH14Q9UHP6 348 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 PNMA8BQ9ULN7 279 aaPredicted RBP15.23■□□□□ 0.03
LIG1-219ENST00000600055 RPL26L1Q9UNX3 145 aaKnown RBP15.23■□□□□ 0.03
LIG1-219ENST00000600055 OR1A2Q9Y585 309 aa15.23■□□□□ 0.03
LIG1-219ENST00000600055 SPTY2D1-AS1A0A0U1RR47 76 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 ANKRD66B4E2M5 251 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 K7ESM1 405 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 ITGAVP06756 1048 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 PIRTP0C851 137 aa15.22■□□□□ 0.03
LIG1-219ENST00000600055 WNT3AP56704 352 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms