RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 LRRN3Q9H3W5 708 aa14.74□□□□□ -0.05
IRF3-223ENST00000599223 ATP13A3Q9H7F0 1226 aa14.74□□□□□ -0.05
IRF3-223ENST00000599223 ZFC3H1O60293 1989 aaKnown RBP14.73□□□□□ -0.05
IRF3-223ENST00000599223 SDK2Q58EX2 2172 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 ARHGAP42A6NI28 874 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 LRRC10BA6NIK2 292 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 SMTNL1A8MU46 457 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 B4DGG1 531 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 DFFAO00273 331 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 TEX33O43247 280 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 ELFN1P0C7U0 828 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 TCF4P15884 667 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 FERP16591 822 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 ERCC2P18074 760 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 ITIH1P19827 911 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 MIPP30301 263 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 CCKBRP32239 447 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 CSNK1DP48730 415 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 INHBCP55103 352 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 DPYSQ14117 519 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 PPP6R3Q5H9R7 873 aaPredicted RBP14.73□□□□□ -0.05
IRF3-223ENST00000599223 DPPA4Q7L190 304 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 RAB11FIP2Q7L804 512 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 SPRED1Q7Z699 444 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 Q8N9G6 341 aaPredicted RBP14.73□□□□□ -0.05
IRF3-223ENST00000599223 OR56A4Q8NGH8 313 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 PTCD2Q8WV60 388 aaKnown RBP14.73□□□□□ -0.05
IRF3-223ENST00000599223 SCG3Q8WXD2 468 aaKnown RBP14.73□□□□□ -0.05
IRF3-223ENST00000599223 CINPQ9BW66 212 aaPredicted RBP14.73□□□□□ -0.05
IRF3-223ENST00000599223 SP110Q9HB58 689 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 RNF215Q9Y6U7 377 aa14.73□□□□□ -0.05
IRF3-223ENST00000599223 TLN1Q9Y490 2541 aaKnown RBP14.73□□□□□ -0.05
IRF3-223ENST00000599223 LRRC53A6NM62 1247 aa14.72□□□□□ -0.05
IRF3-223ENST00000599223 ETV5P41161 510 aa14.72□□□□□ -0.05
IRF3-223ENST00000599223 SLC10A7Q0GE19 358 aa14.72□□□□□ -0.05
IRF3-223ENST00000599223 HLTFQ14527 1009 aaKnown RBP eCLIP14.72□□□□□ -0.05
IRF3-223ENST00000599223 PTPRRQ15256 657 aa14.72□□□□□ -0.05
IRF3-223ENST00000599223 CCDC81Q6ZN84 652 aa14.72□□□□□ -0.05
IRF3-223ENST00000599223 JAMLQ86YT9 394 aa14.72□□□□□ -0.05
IRF3-223ENST00000599223 PGBD5Q8N414 524 aa14.72□□□□□ -0.05
IRF3-223ENST00000599223 FBXO39Q8N4B4 442 aa14.72□□□□□ -0.05
IRF3-223ENST00000599223 AOPEPQ8N6M6 819 aa14.72□□□□□ -0.05
IRF3-223ENST00000599223 FAM46DQ8NEK8 389 aa14.72□□□□□ -0.05
IRF3-223ENST00000599223 CCDC97Q96F63 343 aaPredicted RBP14.72□□□□□ -0.05
IRF3-223ENST00000599223 CWC15Q9P013 229 aaKnown RBP14.72□□□□□ -0.05
IRF3-223ENST00000599223 B4GALT6Q9UBX8 382 aa14.72□□□□□ -0.05
IRF3-223ENST00000599223 PISDQ9UG56 409 aa14.72□□□□□ -0.05
IRF3-223ENST00000599223 LOXL2Q9Y4K0 774 aa14.72□□□□□ -0.05
IRF3-223ENST00000599223 PCDHGA7Q9Y5G6 932 aa14.72□□□□□ -0.05
IRF3-223ENST00000599223 CFAP69A5D8W1 941 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 TMEM191CA6NGB0 347 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 CACNB4O00305 520 aaPredicted RBP14.71□□□□□ -0.05
IRF3-223ENST00000599223 LRCH4O75427 683 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 PEX11BO96011 259 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 TNFP01375 233 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 LHCGRP22888 699 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 TRIM23P36406 574 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 MAZP56270 477 aaKnown RBP14.71□□□□□ -0.05
IRF3-223ENST00000599223 BCL2L1Q07817 233 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 IL10RBQ08334 325 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 EIF3IQ13347 325 aaKnown RBP14.71□□□□□ -0.05
IRF3-223ENST00000599223 CNGA3Q16281 694 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 C14orf28Q4W4Y0 310 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 ERMARDQ5T6L9 678 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 SPECC1LQ69YQ0 1117 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 OGFOD3Q6PK18 319 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 TAF8Q7Z7C8 310 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 SLITRK4Q8IW52 837 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 ANKRD20A12PQ8NF67 263 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 ATL2Q8NHH9 583 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 COQ10AQ96MF6 247 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 PSKH2Q96QS6 385 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 CCNL2Q96S94 520 aaPredicted RBP14.71□□□□□ -0.05
IRF3-223ENST00000599223 BPIFA3Q9BQP9 254 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 WDR26Q9H7D7 661 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 SUDS3Q9H7L9 328 aaPredicted RBP14.71□□□□□ -0.05
IRF3-223ENST00000599223 CBX8Q9HC52 389 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 CYP4F12Q9HCS2 524 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 PARVAQ9NVD7 372 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 ETNK2Q9NVF9 386 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 FOXJ2Q9P0K8 574 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 APPL1Q9UKG1 709 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 ACSL6Q9UKU0 697 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 ST14Q9Y5Y6 855 aa14.71□□□□□ -0.05
IRF3-223ENST00000599223 SPTA1P02549 2419 aa14.71□□□□□ -0.06
IRF3-223ENST00000599223 PRAMEF33A0A0G2JMD5 474 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 PRSS38A1L453 326 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 EIF3CLB5ME19 914 aaKnown RBP14.7□□□□□ -0.06
IRF3-223ENST00000599223 J3QKU1 62 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 PRAMEF10O60809 474 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 FUCA1P04066 466 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 GLB1P16278 677 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 WT1P19544 449 aaPredicted RBP14.7□□□□□ -0.06
IRF3-223ENST00000599223 CR2P20023 1033 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 TNFAIP3P21580 790 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 IL1R2P27930 398 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 SCNN1BP51168 640 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 AP1S1P61966 158 aa14.7□□□□□ -0.06
IRF3-223ENST00000599223 ZFP36L1Q07352 338 aaKnown RBP14.7□□□□□ -0.06
IRF3-223ENST00000599223 ACOX1Q15067 660 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms