RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 NCDNQ9UBB6 729 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 ANAPC5Q9UJX4 755 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 PCDHB9Q9Y5E1 797 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 ZFC3H1O60293 1989 aaKnown RBP15.07■□□□□ 0
TRIM28-207ENST00000597136 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.07■□□□□ 0
TRIM28-207ENST00000597136 A0A1W2PQU0 124 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 TCRBV7S3A2A0A539 114 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 TSPAN11A1L157 253 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 MEI4A8MW99 385 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 A8MX80 341 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 GFRA3O60609 400 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 ANXA9O76027 345 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 MT-CYBP00156 380 aaPredicted RBP15.07■□□□□ 0
TRIM28-207ENST00000597136 APRTP07741 180 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 TGM1P22735 817 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 ITGA8P53708 1063 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 SKOR1P84550 965 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 CALCOCO2Q13137 446 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 RALGPS1Q5JS13 557 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 SYCP2LQ5T4T6 812 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 ANKRD22Q5VYY1 191 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 SEL1L3Q68CR1 1132 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 KCTD11Q693B1 232 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 HIBCHQ6NVY1 386 aaPredicted RBP15.07■□□□□ 0
TRIM28-207ENST00000597136 CYP2U1Q7Z449 544 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 PPIL6Q8IXY8 311 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 NAT8LQ8N9F0 302 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 BBOF1Q8ND07 529 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 C1orf216Q8TAB5 229 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 IFT81Q8WYA0 676 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 RUBCNQ92622 972 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 FOXJ1Q92949 421 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 KDM4CQ9H3R0 1056 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 PCDH12Q9NPG4 1184 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 FAM153AQ9UHL3 310 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 CHKBQ9Y259 395 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 AAR2Q9Y312 384 aaKnown RBP15.07■□□□□ 0
TRIM28-207ENST00000597136 RAI2Q9Y5P3 530 aa15.07■□□□□ 0
TRIM28-207ENST00000597136 A0A0U1RQS6 177 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 ERI2A8K979 691 aaKnown RBP15.06■□□□□ 0
TRIM28-207ENST00000597136 E7EVH7 732 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 NDC80O14777 642 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 LATO43561 262 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 AP2A1O95782 977 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 PRLP01236 227 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 SERPINF2P08697 491 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 PLA2G5P39877 138 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 MPLP40238 635 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 MAPK8P45983 427 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 CARSP49589 748 aaKnown RBP15.06■□□□□ 0
TRIM28-207ENST00000597136 CCR5P51681 352 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 GEMP55040 296 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 CCDC15Q0P6D6 951 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 CUL1Q13616 776 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 FGL2Q14314 439 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 MORF4L2Q15014 288 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 PLA2G2CQ5R387 149 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 TCEAL6Q6IPX3 200 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 BRAT1Q6PJG6 821 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 KDELC2Q7Z4H8 507 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 ALYREFQ86V81 257 aaKnown RBP15.06■□□□□ 0
TRIM28-207ENST00000597136 HOOK3Q86VS8 718 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 SYT12Q8IV01 421 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 PDCD7Q8N8D1 485 aaKnown RBP15.06■□□□□ 0
TRIM28-207ENST00000597136 HCAR2Q8TDS4 363 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 ART4Q93070 314 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 TCEAL3Q969E4 200 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 WRAP53Q9BUR4 548 aaKnown RBP15.06■□□□□ 0
TRIM28-207ENST00000597136 PCED1AQ9H1Q7 454 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 PREBQ9HCU5 417 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 FSCN3Q9NQT6 498 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 EIF2B3Q9NR50 452 aaKnown RBP15.06■□□□□ 0
TRIM28-207ENST00000597136 VPS45Q9NRW7 570 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 GMEB2Q9UKD1 530 aa15.06■□□□□ 0
TRIM28-207ENST00000597136 ARHGEF17Q96PE2 2063 aaPredicted RBP15.06■□□□□ 0
TRIM28-207ENST00000597136 GOLGA6CA6NDK9 693 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 GOLGA6BA6NDN3 693 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 IGLON5A6NGN9 336 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 UPK3BL1B0FP48 263 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 UPK3BL2E5RIL1 263 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 SLC31A1O15431 190 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 PSMD3O43242 534 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 AP1G1O43747 822 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 FZD6O60353 706 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 MMP20O60882 483 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 SOCS5O75159 536 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 PMPCBO75439 489 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 PGLSO95336 258 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 GOLGA6DP0CG33 693 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 TPSB2P20231 275 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 LMAN1P49257 510 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 PLTPP55058 493 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 WNT3AP56704 352 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 CDK16Q00536 496 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 CAV1Q03135 178 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 MPP3Q13368 585 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 SF3A2Q15428 464 aaKnown RBP15.05■□□□□ -0
TRIM28-207ENST00000597136 TPSAB1Q15661 275 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 SLC14A2Q15849 920 aa15.05■□□□□ -0
TRIM28-207ENST00000597136 ZNF284Q2VY69 593 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms