RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 TPX2Q9ULW0 747 aaKnown RBP9.33□□□□□ -0.92
ZNF548-206ENST00000597047 CA5BQ9Y2D0 317 aa9.33□□□□□ -0.92
ZNF548-206ENST00000597047 UTP11Q9Y3A2 253 aaKnown RBP9.33□□□□□ -0.92
ZNF548-206ENST00000597047 ARIH1Q9Y4X5 557 aaPredicted RBP9.33□□□□□ -0.92
ZNF548-206ENST00000597047 PCDHGA2Q9Y5H1 932 aa9.33□□□□□ -0.92
ZNF548-206ENST00000597047 SPO11Q9Y5K1 396 aa9.33□□□□□ -0.92
ZNF548-206ENST00000597047 DOCK9Q9BZ29 2069 aa9.33□□□□□ -0.92
ZNF548-206ENST00000597047 LOC285095A0A1B0GVY8 99 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 TSPAN11A1L157 253 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 FAM187AA6NFU0 413 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 DNALI1O14645 258 aaPredicted RBP9.32□□□□□ -0.92
ZNF548-206ENST00000597047 AURKAO14965 403 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 PCCBP05166 539 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 FGF1P05230 155 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 RHOXF2BP0C7M4 288 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 ATXN1LP0C7T5 689 aaKnown RBP9.32□□□□□ -0.92
ZNF548-206ENST00000597047 C6P13671 934 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 HLA-DPA1P20036 260 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 ITPKAP23677 461 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 CNR2P34972 360 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 MMP12P39900 470 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 ETV3P41162 512 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 CLDN2P57739 230 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 RPS21P63220 83 aaKnown RBP9.32□□□□□ -0.92
ZNF548-206ENST00000597047 SARNPP82979 210 aaKnown RBP9.32□□□□□ -0.92
ZNF548-206ENST00000597047 GUCY2DQ02846 1103 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 SEMA5AQ13591 1074 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 PTPRCAPQ14761 206 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 SMAD1Q15797 465 aaKnown RBP9.32□□□□□ -0.92
ZNF548-206ENST00000597047 CNGA3Q16281 694 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 PLK5Q496M5 336 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 TMEM52BQ4KMG9 183 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 HP1BP3Q5SSJ5 553 aaPredicted RBP9.32□□□□□ -0.92
ZNF548-206ENST00000597047 TEX35Q5T0J7 233 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 CERCAMQ5T4B2 595 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 LYSMD4Q5XG99 296 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 CASC4Q6P4E1 433 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 LIPIQ6XZB0 460 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 RFLNAQ6ZTI6 216 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 SYDE1Q6ZW31 735 aaPredicted RBP9.32□□□□□ -0.92
ZNF548-206ENST00000597047 HSD11B1LQ7Z5J1 315 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 LINC00523Q86TU6 105 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 SLC41A1Q8IVJ1 513 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 NOA1Q8NC60 698 aaKnown RBP9.32□□□□□ -0.92
ZNF548-206ENST00000597047 ZBTB44Q8NCP5 570 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 IFT81Q8WYA0 676 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 FOXJ1Q92949 421 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 TADA1Q96BN2 335 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 SERAC1Q96JX3 654 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 TRIB3Q96RU7 358 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 RHOXF2Q9BQY4 288 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 ZFYVE1Q9HBF4 777 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 ZFR2Q9UPR6 939 aaKnown RBP9.32□□□□□ -0.92
ZNF548-206ENST00000597047 ZNF711Q9Y462 761 aa9.32□□□□□ -0.92
ZNF548-206ENST00000597047 TRPM6Q9BX84 2022 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 CAPN8A6NHC0 703 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 METTL12A8MUP2 240 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 AREL1O15033 823 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 STX7O15400 261 aaKnown RBP9.31□□□□□ -0.92
ZNF548-206ENST00000597047 SPINT1O43278 529 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 AP1G1O43747 822 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 AVILO75366 819 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 RECQL5O94762 991 aaPredicted RBP9.31□□□□□ -0.92
ZNF548-206ENST00000597047 HEXIM1O94992 359 aaKnown RBP9.31□□□□□ -0.92
ZNF548-206ENST00000597047 IGLV3-19P01714 112 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 C1SP09871 688 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 LHCGRP22888 699 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 MGAT1P26572 445 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 ADRA1AP35348 466 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 SUOXP51687 545 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 ITGA8P53708 1063 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 RPL26P61254 145 aaKnown RBP9.31□□□□□ -0.92
ZNF548-206ENST00000597047 CRADDP78560 199 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 CDH17Q12864 832 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 CALCOCO2Q13137 446 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 STAT4Q14765 748 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 SETMARQ53H47 684 aaPredicted RBP9.31□□□□□ -0.92
ZNF548-206ENST00000597047 WDR45BQ5MNZ6 344 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 KCTD11Q693B1 232 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 KIAA1161Q6NSJ0 714 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 RANBP10Q6VN20 620 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 KDM7AQ6ZMT4 941 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 Q6ZVL8 140 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 CYP2U1Q7Z449 544 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 PCGF5Q86SE9 256 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 C11orf74Q86VG3 221 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 PPIL6Q8IXY8 311 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 ZCCHC9Q8N567 271 aaKnown RBP9.31□□□□□ -0.92
ZNF548-206ENST00000597047 LRRN4CLQ8ND94 238 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 CPT1BQ92523 772 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 SNF8Q96H20 258 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 PWWP2AQ96N64 755 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 ERP44Q9BS26 406 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 RAB17Q9H0T7 212 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 ARRDC1-AS1Q9H2J1 176 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 KDM4CQ9H3R0 1056 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 SUDS3Q9H7L9 328 aaPredicted RBP9.31□□□□□ -0.92
ZNF548-206ENST00000597047 PKD2L2Q9NZM6 624 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 MOSPD1Q9UJG1 213 aa9.31□□□□□ -0.92
ZNF548-206ENST00000597047 RPL26L1Q9UNX3 145 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms