RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ZCCHC9Q8N567 271 aaKnown RBP19.38■□□□□ 0.69
PNKP-207ENST00000596014 CCDC89Q8N998 374 aa19.38■□□□□ 0.69
PNKP-207ENST00000596014 ATL2Q8NHH9 583 aa19.38■□□□□ 0.69
PNKP-207ENST00000596014 RNF14Q9UBS8 474 aa19.38■□□□□ 0.69
PNKP-207ENST00000596014 PTPRZ1P23471 2315 aaPredicted RBP19.37■□□□□ 0.69
PNKP-207ENST00000596014 BCAT2O15382 392 aaPredicted RBP19.37■□□□□ 0.69
PNKP-207ENST00000596014 GNSP15586 552 aa19.37■□□□□ 0.69
PNKP-207ENST00000596014 LHCGRP22888 699 aa19.37■□□□□ 0.69
PNKP-207ENST00000596014 COILP38432 576 aaPredicted RBP19.37■□□□□ 0.69
PNKP-207ENST00000596014 WHAMMP3Q1A5X7 153 aa19.37■□□□□ 0.69
PNKP-207ENST00000596014 CCDC70Q6NSX1 233 aa19.37■□□□□ 0.69
PNKP-207ENST00000596014 CCDC137Q6PK04 289 aaKnown RBP19.37■□□□□ 0.69
PNKP-207ENST00000596014 KLHDC8BQ8IXV7 354 aa19.37■□□□□ 0.69
PNKP-207ENST00000596014 DCLK2Q8N568 766 aa19.37■□□□□ 0.69
PNKP-207ENST00000596014 ASB12Q8WXK4 309 aa19.37■□□□□ 0.69
PNKP-207ENST00000596014 SERAC1Q96JX3 654 aa19.37■□□□□ 0.69
PNKP-207ENST00000596014 SUSD2Q9UGT4 822 aa19.37■□□□□ 0.69
PNKP-207ENST00000596014 CAPN8A6NHC0 703 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 PRAMEF26H0Y7S4 382 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 WNT9AO14904 365 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 PHF2O75151 1096 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 HEXIM1O94992 359 aaKnown RBP19.36■□□□□ 0.69
PNKP-207ENST00000596014 ELFN1P0C7U0 828 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 ZSCAN5DPP0CG00 497 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 C6P13671 934 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 PAFAH1B1P43034 410 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 LMNB2Q03252 620 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 SPEM2Q0P670 501 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 CNGA3Q16281 694 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 FAXCQ5TGI0 409 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 CRTC1Q6UUV9 634 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 TSPAN33Q86UF1 283 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 TAB3Q8N5C8 712 aaPredicted RBP19.36■□□□□ 0.69
PNKP-207ENST00000596014 CEP112Q8N8E3 955 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 UBXN4Q92575 508 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 LYSMD1Q96S90 227 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 FSD1LQ9BXM9 530 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 TM9SF3Q9HD45 589 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 COQ6Q9Y2Z9 468 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 GVINP1Q7Z2Y8 2422 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 A0A0U1RQS6 177 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 A0A1B0GTW7 788 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 PATE3B3GLJ2 98 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 PDE2AO00408 941 aaPredicted RBP19.36■□□□□ 0.69
PNKP-207ENST00000596014 AGTP01019 485 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 ATXN1LP0C7T5 689 aaKnown RBP19.36■□□□□ 0.69
PNKP-207ENST00000596014 HNRNPA2B1P22626 353 aaKnown RBP19.36■□□□□ 0.69
PNKP-207ENST00000596014 RPL22P35268 128 aaKnown RBP19.36■□□□□ 0.69
PNKP-207ENST00000596014 CHRNA4P43681 627 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 TNNT3P45378 269 aaPredicted RBP19.36■□□□□ 0.69
PNKP-207ENST00000596014 RACK1P63244 317 aaKnown RBP19.36■□□□□ 0.69
PNKP-207ENST00000596014 ARHGEF7Q14155 803 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 DUOXA1Q1HG43 343 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 SIRPB2Q5JXA9 342 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 NAPEPLDQ6IQ20 393 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 CBARPQ8N350 705 aaPredicted RBP19.36■□□□□ 0.69
PNKP-207ENST00000596014 CEP76Q8TAP6 659 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 SLC6A18Q96N87 628 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 HINFPQ9BQA5 517 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 SMOC1Q9H4F8 434 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 FZD3Q9NPG1 666 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 PAK5Q9P286 719 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 PIEZO1Q92508 2521 aa19.36■□□□□ 0.69
PNKP-207ENST00000596014 GOLGA6CA6NDK9 693 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 GOLGA6BA6NDN3 693 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 LZTS3O60299 673 aaPredicted RBP19.35■□□□□ 0.69
PNKP-207ENST00000596014 GFRA3O60609 400 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 LRP3O75074 770 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 GOLGA6DP0CG33 693 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 ADRA1AP35348 466 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 SLC1A5Q15758 541 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 KCTD19Q17RG1 926 aaPredicted RBP19.35■□□□□ 0.69
PNKP-207ENST00000596014 TEX35Q5T0J7 233 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 LRRC66Q68CR7 880 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 KCTD11Q693B1 232 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 RANBP10Q6VN20 620 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 RABEPKQ7Z6M1 372 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 SLC25A41Q8N5S1 370 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 LENG8Q96PV6 779 aaPredicted RBP19.35■□□□□ 0.69
PNKP-207ENST00000596014 KLF6Q99612 283 aaPredicted RBP19.35■□□□□ 0.69
PNKP-207ENST00000596014 MYOCQ99972 504 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 FICDQ9BVA6 458 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 ETNK1Q9HBU6 452 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 GOLGA6AQ9NYA3 693 aa19.35■□□□□ 0.69
PNKP-207ENST00000596014 PRR5-ARHGAP8B1AHC4 643 aa19.34■□□□□ 0.69
PNKP-207ENST00000596014 RAD51BO15315 384 aa19.34■□□□□ 0.69
PNKP-207ENST00000596014 ZNF806P0C7X5 589 aa19.34■□□□□ 0.69
PNKP-207ENST00000596014 HLA-DPA1P20036 260 aa19.34■□□□□ 0.69
PNKP-207ENST00000596014 TGM1P22735 817 aa19.34■□□□□ 0.69
PNKP-207ENST00000596014 AKT2P31751 481 aa19.34■□□□□ 0.69
PNKP-207ENST00000596014 FDFT1P37268 417 aa19.34■□□□□ 0.69
PNKP-207ENST00000596014 FNTAP49354 379 aa19.34■□□□□ 0.69
PNKP-207ENST00000596014 AFF3P51826 1226 aaKnown RBP19.34■□□□□ 0.69
PNKP-207ENST00000596014 OLIG2Q13516 323 aa19.34■□□□□ 0.69
PNKP-207ENST00000596014 SPARCL1Q14515 664 aa19.34■□□□□ 0.69
PNKP-207ENST00000596014 STAT4Q14765 748 aa19.34■□□□□ 0.69
PNKP-207ENST00000596014 AGERQ15109 404 aa19.34■□□□□ 0.69
PNKP-207ENST00000596014 CDKN3Q16667 212 aa19.34■□□□□ 0.69
PNKP-207ENST00000596014 TRIM61Q5EBN2 209 aa19.34■□□□□ 0.69
PNKP-207ENST00000596014 DENND2CQ68D51 928 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms