RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 PSTKQ8IV42 348 aaKnown RBP20.54■□□□□ 0.88
TRIM47-207ENST00000593089 Q8N9G6 341 aaPredicted RBP20.54■□□□□ 0.88
TRIM47-207ENST00000593089 FAM46DQ8NEK8 389 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 GPR156Q8NFN8 814 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 LGR4Q9BXB1 951 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 LRRN3Q9H3W5 708 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 WDR70Q9NW82 654 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 AIPL1Q9NZN9 384 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 TMEM63CQ9P1W3 806 aa20.54■□□□□ 0.88
TRIM47-207ENST00000593089 MGAQ8IWI9 3026 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 H3BRJ5 948 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 PLD2O14939 933 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 ITGA2BP08514 1039 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 SKILP12757 684 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 KELP23276 732 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 PRKCIP41743 596 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 MLLT3P42568 568 aaPredicted RBP20.53■□□□□ 0.88
TRIM47-207ENST00000593089 ZNF135P52742 658 aaPredicted RBP20.53■□□□□ 0.88
TRIM47-207ENST00000593089 INHBCP55103 352 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 ZNF235Q14590 738 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 SMTNL2Q2TAL5 461 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 SFTPA2Q8IWL1 248 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 PELI3Q8N2H9 469 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 FBXO39Q8N4B4 442 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 LZTR1Q8N653 840 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 OR6C4Q8NGE1 309 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 PDCD6IPQ8WUM4 868 aaKnown RBP20.53■□□□□ 0.88
TRIM47-207ENST00000593089 STRADBQ9C0K7 418 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 TMEM168Q9H0V1 697 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 WDR26Q9H7D7 661 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 CYP4F12Q9HCS2 524 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.53■□□□□ 0.88
TRIM47-207ENST00000593089 B4GALT6Q9UBX8 382 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 PCDHGC4Q9Y5F7 938 aa20.53■□□□□ 0.88
TRIM47-207ENST00000593089 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.52■□□□□ 0.88
TRIM47-207ENST00000593089 SMTNL1A8MU46 457 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 B4DGG1 531 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 ZIC2O95409 532 aaPredicted RBP20.52■□□□□ 0.88
TRIM47-207ENST00000593089 HGFP14210 728 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 TCF4P15884 667 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 AMPD1P23109 780 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 IL1R2P27930 398 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 UGT1A5P35504 534 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 TRIM23P36406 574 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 ARL4AP40617 200 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 CLN3Q13286 438 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 ZSCAN23Q3MJ62 389 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 DENND2CQ68D51 928 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 PNCKQ6P2M8 343 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 RAB11FIP2Q7L804 512 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 CCNJLQ8IV13 435 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 CCL4L1Q8NHW4 92 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 HSPH1Q92598 858 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 TRIM11Q96F44 468 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 ZNF599Q96NL3 588 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 BPIFA3Q9BQP9 254 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 DPEP2Q9H4A9 486 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 SUDS3Q9H7L9 328 aaPredicted RBP20.52■□□□□ 0.88
TRIM47-207ENST00000593089 MRPL47Q9HD33 250 aaKnown RBP20.52■□□□□ 0.88
TRIM47-207ENST00000593089 ETNK2Q9NVF9 386 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 SSUH2Q9Y2M2 353 aa20.52■□□□□ 0.88
TRIM47-207ENST00000593089 A0A1W2PQC6 194 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 TMX2-CTNND1H3BSU7 103 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 AGRPO00253 132 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 TNFRSF10CO14798 259 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 NOBOXO60393 691 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 CPP00450 1065 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 HOXC4P09017 264 aaPredicted RBP20.51■□□□□ 0.87
TRIM47-207ENST00000593089 MYBL1P10243 752 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 EIF3IQ13347 325 aaKnown RBP20.51■□□□□ 0.87
TRIM47-207ENST00000593089 DPYSL2Q16555 572 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 OGFOD3Q6PK18 319 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 TMCO3Q6UWJ1 677 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 CCDC81Q6ZN84 652 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 ZNF605Q86T29 641 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 JAMLQ86YT9 394 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 PGBD5Q8N414 524 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 NUS1Q96E22 293 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 COQ10AQ96MF6 247 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 TMEM74Q96NL1 305 aa20.51■□□□□ 0.87
TRIM47-207ENST00000593089 NAP1L5Q96NT1 182 aaPredicted RBP20.51■□□□□ 0.87
TRIM47-207ENST00000593089 ATXN7L1Q9ULK2 861 aaPredicted RBP20.51■□□□□ 0.87
TRIM47-207ENST00000593089 PRSS38A1L453 326 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 GLB1P16278 677 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 SLC5A2P31639 672 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 VIPR1P32241 457 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 PCK1P35558 622 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 CNGA3Q16281 694 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 C14orf28Q4W4Y0 310 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 CERCAMQ5T4B2 595 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 KIAA1614Q5VZ46 1190 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 SPECC1LQ69YQ0 1117 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 POLNQ7Z5Q5 900 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 SNRNP27Q8WVK2 155 aaKnown RBP20.5■□□□□ 0.87
TRIM47-207ENST00000593089 NUDCD1Q96RS6 583 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.5■□□□□ 0.87
TRIM47-207ENST00000593089 LRIT1Q9P2V4 623 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 APPL1Q9UKG1 709 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 RNF215Q9Y6U7 377 aa20.5■□□□□ 0.87
TRIM47-207ENST00000593089 UNC13CQ8NB66 2214 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms