RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 NSUN2Q08J23 767 aaKnown RBP eCLIP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 SFSWAPQ12872 951 aaKnown RBP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 RALGDSQ12967 914 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 TUBB2AQ13885 445 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 MSS51Q4VC12 460 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 CCDC38Q502W7 563 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 ZNF805Q5CZA5 627 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 HP1BP3Q5SSJ5 553 aaPredicted RBP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 ERMP1Q7Z2K6 904 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 HDDC3Q8N4P3 179 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 ZCCHC9Q8N567 271 aaKnown RBP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 NAT8LQ8N9F0 302 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 CADM4Q8NFZ8 388 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 OR2I1PQ8NGU4 316 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 FOXJ1Q92949 421 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 OMDQ99983 421 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 TBL1YQ9BQ87 522 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 ERP44Q9BS26 406 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 TUBB2BQ9BVA1 445 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 GTPBP2Q9BX10 602 aaKnown RBP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 NUSAP1Q9BXS6 441 aaKnown RBP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 BTBD1Q9H0C5 482 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 SUV39H2Q9H5I1 410 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 ATP13A3Q9H7F0 1226 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 ANKZF1Q9H8Y5 726 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 PCDH12Q9NPG4 1184 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 B4GALT6Q9UBX8 382 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 EIF2B4Q9UI10 523 aaKnown RBP9.69□□□□□ -0.86
DDX39A-220ENST00000593008 NCKAP1Q9Y2A7 1128 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 KCTD3Q9Y597 815 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 SLCO1B1Q9Y6L6 691 aa9.69□□□□□ -0.86
DDX39A-220ENST00000593008 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.68□□□□□ -0.86
DDX39A-220ENST00000593008 LOC285095A0A1B0GVY8 99 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 FAM187AA6NFU0 413 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 UPK3BL1B0FP48 263 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 UPK3BL2E5RIL1 263 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 E7EVH7 732 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 SLC30A4O14863 429 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 ALOX15BO15296 676 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 SOCS5O75159 536 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 PRNPP04156 253 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 ADRB3P13945 408 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 ENGP17813 658 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 SDHBP21912 280 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 ITGB7P26010 798 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 FDFT1P37268 417 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 LMAN1P49257 510 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 CARSP49589 748 aaKnown RBP9.68□□□□□ -0.86
DDX39A-220ENST00000593008 GEMP55040 296 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 SESN2P58004 480 aaPredicted RBP9.68□□□□□ -0.86
DDX39A-220ENST00000593008 PPP2CBP62714 309 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 PPP2CAP67775 309 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 MPP3Q13368 585 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 FASTKD3Q14CZ7 662 aaKnown RBP9.68□□□□□ -0.86
DDX39A-220ENST00000593008 DUOXA1Q1HG43 343 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 ERCC6LQ2NKX8 1250 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 UAP1L1Q3KQV9 507 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 WDR45BQ5MNZ6 344 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 FNBP1LQ5T0N5 605 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 CERCAMQ5T4B2 595 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 ARMC12Q5T9G4 340 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 PEAR1Q5VY43 1037 aaPredicted RBP9.68□□□□□ -0.86
DDX39A-220ENST00000593008 HIBCHQ6NVY1 386 aaPredicted RBP9.68□□□□□ -0.86
DDX39A-220ENST00000593008 SLC23A3Q6PIS1 610 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.68□□□□□ -0.86
DDX39A-220ENST00000593008 CAND1Q86VP6 1230 aaKnown RBP9.68□□□□□ -0.86
DDX39A-220ENST00000593008 IGDCC3Q8IVU1 814 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 PLPP6Q8IY26 295 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 PAF1Q8N7H5 531 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 PNPLA1Q8N8W4 532 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 TMIEQ8NEW7 156 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 KLK6Q92876 244 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 EID2BQ96D98 161 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 SNF8Q96H20 258 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 FEM1CQ96JP0 617 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 TUBGCP5Q96RT8 1024 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 FERMT1Q9BQL6 677 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 RTKNQ9BST9 563 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 WRAP53Q9BUR4 548 aaKnown RBP9.68□□□□□ -0.86
DDX39A-220ENST00000593008 FSD1LQ9BXM9 530 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 CPEB1Q9BZB8 566 aaKnown RBP9.68□□□□□ -0.86
DDX39A-220ENST00000593008 EPB41L5Q9HCM4 733 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 SYBUQ9NX95 663 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 TPX2Q9ULW0 747 aaKnown RBP9.68□□□□□ -0.86
DDX39A-220ENST00000593008 SHOC2Q9UQ13 582 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 COQ6Q9Y2Z9 468 aa9.68□□□□□ -0.86
DDX39A-220ENST00000593008 BPTFQ12830 3046 aa9.67□□□□□ -0.86
DDX39A-220ENST00000593008 RALGAPA1Q6GYQ0 2036 aa9.67□□□□□ -0.86
DDX39A-220ENST00000593008 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.67□□□□□ -0.86
DDX39A-220ENST00000593008 CAPN8A6NHC0 703 aa9.67□□□□□ -0.86
DDX39A-220ENST00000593008 C1QTNF3-AMACRE9PGA6 284 aa9.67□□□□□ -0.86
DDX39A-220ENST00000593008 CDX4O14627 284 aaPredicted RBP9.67□□□□□ -0.86
DDX39A-220ENST00000593008 GPR39O43194 453 aa9.67□□□□□ -0.86
DDX39A-220ENST00000593008 ZNF189O75820 626 aaPredicted RBP9.67□□□□□ -0.86
DDX39A-220ENST00000593008 ANXA9O76027 345 aa9.67□□□□□ -0.86
DDX39A-220ENST00000593008 SUN1O94901 812 aa9.67□□□□□ -0.86
DDX39A-220ENST00000593008 NDST3O95803 873 aa9.67□□□□□ -0.86
DDX39A-220ENST00000593008 ADH1BP00325 375 aa9.67□□□□□ -0.86
DDX39A-220ENST00000593008 C1SP09871 688 aa9.67□□□□□ -0.86
DDX39A-220ENST00000593008 GNSP15586 552 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms