RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 RFPL3O75679 317 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 PIAS2O75928 621 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 PGLSO95336 258 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 FTCDO95954 541 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 PCCBP05166 539 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 C1SP09871 688 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 CKMT2P17540 419 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 CTPS1P17812 591 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 TGM2P21980 687 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 CTNNA2P26232 953 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 RABIFP47224 123 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 EPHB1P54762 984 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 PFN3P60673 137 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 IFI35P80217 286 aaPredicted RBP13.98□□□□□ -0.17
CLIP3-205ENST00000592017 ADCY2Q08462 1091 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 RALGDSQ12967 914 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 PDE1CQ14123 709 aaPredicted RBP13.98□□□□□ -0.17
CLIP3-205ENST00000592017 IRF4Q15306 451 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 TAZQ16635 292 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 DENND2CQ68D51 928 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 DPPA4Q7L190 304 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 BZW1Q7L1Q6 419 aaKnown RBP13.98□□□□□ -0.17
CLIP3-205ENST00000592017 PEX26Q7Z412 305 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 DCP2Q8IU60 420 aaKnown RBP13.98□□□□□ -0.17
CLIP3-205ENST00000592017 GALNT15Q8N3T1 639 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 LRRC57Q8N9N7 239 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 TP53I13Q8NBR0 393 aaPredicted RBP13.98□□□□□ -0.17
CLIP3-205ENST00000592017 CCDC112Q8NEF3 446 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 FAM174AQ8TBP5 190 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 P3H4Q92791 437 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 IFT43Q96FT9 208 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 AGAP3Q96P47 875 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 GRPEL1Q9HAV7 217 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 MBNL1Q9NR56 388 aaKnown RBP13.98□□□□□ -0.17
CLIP3-205ENST00000592017 DNAJC28Q9NX36 388 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 AMACRQ9UHK6 382 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 AMFRQ9UKV5 643 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 PACSIN2Q9UNF0 486 aaPredicted RBP13.98□□□□□ -0.17
CLIP3-205ENST00000592017 PCDHA3Q9Y5H8 950 aa13.98□□□□□ -0.17
CLIP3-205ENST00000592017 LAMA5O15230 3695 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 APC2O95996 2303 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 DOCK9Q9BZ29 2069 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 ARID1BQ8NFD5 2236 aaPredicted RBP13.97□□□□□ -0.17
CLIP3-205ENST00000592017 SPTY2D1-AS1A0A0U1RR47 76 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 FFAR2O15552 330 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 ARHGAP6O43182 974 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 MYF5P13349 255 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 CA4P22748 312 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 NFKBIAP25963 317 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 VIPR1P32241 457 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 CD86P42081 329 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 NR2C2P49116 596 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 RWDD2BP57060 319 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 NIPAL4Q0D2K0 466 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 LRRC14Q15048 493 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 ACOX1Q15067 660 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 PTPRRQ15256 657 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 PPP2R5EQ16537 467 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 ALG1LQ6GMV1 187 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 LIPIQ6XZB0 460 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 USP45Q70EL2 814 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 NT5DC3Q86UY8 548 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 ZC3H18Q86VM9 953 aaKnown RBP13.97□□□□□ -0.17
CLIP3-205ENST00000592017 TMPRSS12Q86WS5 348 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 PROSER1Q86XN7 944 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 SYCE1Q8N0S2 351 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 LPCAT1Q8NF37 534 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 OR4C6Q8NH72 309 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 MDM1Q8TC05 714 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 TFB1MQ8WVM0 346 aaKnown RBP13.97□□□□□ -0.17
CLIP3-205ENST00000592017 IL12RB2Q99665 862 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 TDRD1Q9BXT4 1180 aaKnown RBP13.97□□□□□ -0.17
CLIP3-205ENST00000592017 TSGA10Q9BZW7 698 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 CCDC86Q9H6F5 360 aaKnown RBP13.97□□□□□ -0.17
CLIP3-205ENST00000592017 RALYQ9UKM9 306 aaKnown RBP13.97□□□□□ -0.17
CLIP3-205ENST00000592017 PHTF1Q9UMS5 762 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 CHKBQ9Y259 395 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 ADGRG1Q9Y653 693 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 CAPN6Q9Y6Q1 641 aa13.97□□□□□ -0.17
CLIP3-205ENST00000592017 KNTC1P50748 2209 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 CELSR3Q9NYQ7 3312 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 NPIPB15A6NHN6 443 aaPredicted RBP13.96□□□□□ -0.17
CLIP3-205ENST00000592017 RECQL5O94762 991 aaPredicted RBP13.96□□□□□ -0.17
CLIP3-205ENST00000592017 CSF2P04141 144 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 PTMAP06454 111 aaKnown RBP13.96□□□□□ -0.17
CLIP3-205ENST00000592017 PDHA1P08559 390 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 ALPIP09923 528 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 CYP2A6P11509 494 aaPredicted RBP13.96□□□□□ -0.17
CLIP3-205ENST00000592017 NME1P15531 152 aaKnown RBP13.96□□□□□ -0.17
CLIP3-205ENST00000592017 CES1P23141 567 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 CETN2P41208 172 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 THOP1P52888 689 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 EIF2B5Q13144 721 aaKnown RBP13.96□□□□□ -0.17
CLIP3-205ENST00000592017 ILKQ13418 452 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 PRKD1Q15139 912 aaPredicted RBP13.96□□□□□ -0.17
CLIP3-205ENST00000592017 CNGA3Q16281 694 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 WSCD2Q2TBF2 565 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 AADACL2Q6P093 401 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 PARGQ86W56 976 aa13.96□□□□□ -0.17
CLIP3-205ENST00000592017 CNTD1Q8N815 330 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms