RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 ATP6V0D2Q8N8Y2 350 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 BHMTQ93088 406 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 TSPAN17Q96FV3 270 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 C3orf30Q96M34 536 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 CRISPLD1Q9H336 500 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 FBXO44Q9H4M3 255 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 MID1IP1Q9NPA3 183 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 CCDC162PA2VCL2 907 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 ADAMTS4O75173 837 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 CAPN15O75808 1086 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 OR6B1O95007 311 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 GLP2RO95838 553 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 LEPRP48357 1165 aaKnown RBP16.8■□□□□ 0.28
CTDP1-207ENST00000591598 RGMBQ6NW40 437 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 SCIMPQ6UWF3 145 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 GPR62Q9BZJ7 368 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 SCML2Q9UQR0 700 aa16.8■□□□□ 0.28
CTDP1-207ENST00000591598 ECT2LQ008S8 904 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 BIRC2Q13490 618 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 SEMA3AQ14563 771 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 NFE2Q16621 373 aaPredicted RBP16.79■□□□□ 0.28
CTDP1-207ENST00000591598 ARTNQ5T4W7 220 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 AMIGO2Q86SJ2 522 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 SATL1Q86VE3 508 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 UMODL1-AS1Q8N2C9 162 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 GABPB2Q8TAK5 448 aaPredicted RBP16.79■□□□□ 0.28
CTDP1-207ENST00000591598 TRPC4APQ8TEL6 797 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 EME1Q96AY2 570 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 NR5A2O00482 541 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 TPST1O60507 370 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 TYMPP19971 482 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 FMO4P31512 558 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 CASP2P42575 452 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 FOXA1P55317 472 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 PFKPQ01813 784 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 MAP7D1Q3KQU3 841 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 HABP4Q5JVS0 413 aaKnown RBP16.79■□□□□ 0.28
CTDP1-207ENST00000591598 ISCA2Q86U28 154 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 CPSF7Q8N684 471 aaKnown RBP16.79■□□□□ 0.28
CTDP1-207ENST00000591598 SLC39A13Q96H72 371 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 SARS2Q9NP81 518 aaKnown RBP16.79■□□□□ 0.28
CTDP1-207ENST00000591598 SNX13Q9Y5W8 968 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 MIA3Q5JRA6 1907 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 MRASO14807 208 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 CD3EAPO15446 510 aaKnown RBP16.79■□□□□ 0.28
CTDP1-207ENST00000591598 RNASEH2AO75792 299 aaKnown RBP16.79■□□□□ 0.28
CTDP1-207ENST00000591598 REP15Q6BDI9 236 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 KIAA0408Q6ZU52 694 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 EFHBQ8N7U6 833 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 HMGCLL1Q8TB92 370 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 BTN2A3PQ96KV6 586 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 ZNF385DQ9H6B1 395 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 SEMA4BQ9NPR2 832 aaPredicted RBP16.79■□□□□ 0.28
CTDP1-207ENST00000591598 EPS15L1Q9UBC2 864 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 AP4B1Q9Y6B7 739 aa16.79■□□□□ 0.28
CTDP1-207ENST00000591598 ZNF236Q9UL36 1845 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 ARHGEF37A1IGU5 675 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 LDB2O43679 373 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 TLR5O60602 858 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 CRCPO75575 148 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 GSTT1P30711 240 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 GRIA2P42262 883 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 FCGRTP55899 365 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 ZNF598Q86UK7 904 aaKnown RBP16.78■□□□□ 0.28
CTDP1-207ENST00000591598 ARRDC2Q8TBH0 407 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 UROC1Q96N76 676 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 POLR1EQ9GZS1 481 aaKnown RBP16.78■□□□□ 0.28
CTDP1-207ENST00000591598 UTP6Q9NYH9 597 aaKnown RBP16.78■□□□□ 0.28
CTDP1-207ENST00000591598 NDST2P52849 883 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 STX1BP61266 288 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 RPS24P62847 133 aaKnown RBP16.78■□□□□ 0.28
CTDP1-207ENST00000591598 IRF5Q13568 498 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 ACAP2Q15057 778 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 CYTH1Q15438 398 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 AFMIDQ63HM1 303 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 ZNF549Q6P9A3 640 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 IFNEQ86WN2 208 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 LRCH3Q96II8 777 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 CENPKQ9BS16 269 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 GSTO2Q9H4Y5 243 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 BPIFA1Q9NP55 256 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 PRDM5Q9NQX1 630 aaPredicted RBP16.78■□□□□ 0.28
CTDP1-207ENST00000591598 VPS45Q9NRW7 570 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 TMEM248Q9NWD8 314 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 CACNA2D2Q9NY47 1150 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 ABT1Q9ULW3 272 aaKnown RBP16.78■□□□□ 0.28
CTDP1-207ENST00000591598 TIMM22Q9Y584 194 aa16.78■□□□□ 0.28
CTDP1-207ENST00000591598 PRORSD1PA6NEY8 169 aa16.77■□□□□ 0.28
CTDP1-207ENST00000591598 SUPT3HB4E1H0 165 aa16.77■□□□□ 0.28
CTDP1-207ENST00000591598 FBP2O00757 339 aa16.77■□□□□ 0.28
CTDP1-207ENST00000591598 SUPT3HO75486 399 aa16.77■□□□□ 0.28
CTDP1-207ENST00000591598 LINC00032P0C843 101 aa16.77■□□□□ 0.28
CTDP1-207ENST00000591598 IRF1P10914 325 aa16.77■□□□□ 0.28
CTDP1-207ENST00000591598 CKBP12277 381 aa16.77■□□□□ 0.28
CTDP1-207ENST00000591598 RPL17P18621 184 aaKnown RBP16.77■□□□□ 0.28
CTDP1-207ENST00000591598 CHRM3P20309 590 aa16.77■□□□□ 0.28
CTDP1-207ENST00000591598 SLC7A2P52569 658 aa16.77■□□□□ 0.28
CTDP1-207ENST00000591598 CHN2P52757 468 aa16.77■□□□□ 0.28
CTDP1-207ENST00000591598 SH3BP2P78314 561 aa16.77■□□□□ 0.28
CTDP1-207ENST00000591598 CAP1Q01518 475 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms