RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 PCDH12Q9NPG4 1184 aa14.24□□□□□ -0.13
SAFB2-205ENST00000590000 STARD5Q9NSY2 213 aa14.24□□□□□ -0.13
SAFB2-205ENST00000590000 DKK3Q9UBP4 350 aa14.24□□□□□ -0.13
SAFB2-205ENST00000590000 PISDQ9UG56 409 aa14.24□□□□□ -0.13
SAFB2-205ENST00000590000 GPR34Q9UPC5 381 aa14.24□□□□□ -0.13
SAFB2-205ENST00000590000 ST14Q9Y5Y6 855 aa14.24□□□□□ -0.13
SAFB2-205ENST00000590000 LRRK2Q5S007 2527 aa14.24□□□□□ -0.13
SAFB2-205ENST00000590000 PRAMEF33A0A0G2JMD5 474 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 RASA4BC9J798 803 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 J3KR12 359 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 RASA4O43374 803 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 PRAMEF10O60809 474 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 FUCA1P04066 466 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 RPIAP49247 311 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 SRP54P61011 504 aaKnown RBP14.23□□□□□ -0.13
SAFB2-205ENST00000590000 C16orf72Q14CZ0 275 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 LRRC14Q15048 493 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 CA9Q16790 459 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 ACBD5Q5T8D3 534 aaPredicted RBP14.23□□□□□ -0.13
SAFB2-205ENST00000590000 ALKBH5Q6P6C2 394 aaKnown RBP14.23□□□□□ -0.13
SAFB2-205ENST00000590000 OGFOD3Q6PK18 319 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 PRICKLE2Q7Z3G6 844 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 GAS2L3Q86XJ1 694 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 DTX1Q86Y01 620 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 SLITRK4Q8IW52 837 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 RTL3Q8N8U3 475 aaKnown RBP14.23□□□□□ -0.13
SAFB2-205ENST00000590000 Q8N9G6 341 aaPredicted RBP14.23□□□□□ -0.13
SAFB2-205ENST00000590000 OR8K1Q8NGG5 319 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 CXorf40AQ8TE69 158 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 NTAN1Q96AB6 310 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 BTBD6Q96KE9 485 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 GDAP1L1Q96MZ0 367 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 GFM1Q96RP9 751 aaKnown RBP14.23□□□□□ -0.13
SAFB2-205ENST00000590000 RBM15Q96T37 977 aaKnown RBP eCLIP14.23□□□□□ -0.13
SAFB2-205ENST00000590000 CHP1Q99653 195 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 LGR4Q9BXB1 951 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 TRIM5Q9C035 493 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 LOXL2Q9Y4K0 774 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 RNF215Q9Y6U7 377 aa14.23□□□□□ -0.13
SAFB2-205ENST00000590000 RIOK3O14730 519 aaKnown RBP14.22□□□□□ -0.13
SAFB2-205ENST00000590000 B4GAT1O43505 415 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 MIPP30301 263 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 HNRNPH3P31942 346 aaKnown RBP14.22□□□□□ -0.13
SAFB2-205ENST00000590000 MMP12P39900 470 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 LIG3P49916 1009 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 PEX5P50542 639 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 RHOAP61586 193 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 SRSF1Q07955 248 aaKnown RBP eCLIP14.22□□□□□ -0.13
SAFB2-205ENST00000590000 SERINC3Q13530 473 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 CLCA4Q14CN2 919 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 AGERQ15109 404 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 UGP2Q16851 508 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 EFHC2Q5JST6 749 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 CERCAMQ5T4B2 595 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 ESRP1Q6NXG1 681 aaKnown RBP14.22□□□□□ -0.13
SAFB2-205ENST00000590000 ZNF574Q6ZN55 896 aaPredicted RBP14.22□□□□□ -0.13
SAFB2-205ENST00000590000 JAMLQ86YT9 394 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 CAMK1DQ8IU85 385 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 TP53INP2Q8IXH6 220 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 FSTL5Q8N475 847 aaPredicted RBP14.22□□□□□ -0.13
SAFB2-205ENST00000590000 WDR48Q8TAF3 677 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 ARHGEF26Q96DR7 871 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 SGF29Q96ES7 293 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 TRIM11Q96F44 468 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 CCDC97Q96F63 343 aaPredicted RBP14.22□□□□□ -0.13
SAFB2-205ENST00000590000 PEBP4Q96S96 227 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 TMEM168Q9H0V1 697 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 SEMA6CQ9H3T2 930 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 PCDHGA4Q9Y5G9 962 aa14.22□□□□□ -0.13
SAFB2-205ENST00000590000 SPENQ96T58 3664 aaKnown RBP14.21□□□□□ -0.13
SAFB2-205ENST00000590000 RASGRP1O95267 797 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 IGSF6O95976 241 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 PCCBP05166 539 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 MYBL1P10243 752 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 CCL4P13236 92 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 EPHB2P29323 1055 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 B4GALNT1Q00973 533 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 HLTFQ14527 1009 aaKnown RBP eCLIP14.21□□□□□ -0.13
SAFB2-205ENST00000590000 PTPRRQ15256 657 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 ELOCQ15369 112 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 TBR1Q16650 682 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 TSR1Q2NL82 804 aaKnown RBP14.21□□□□□ -0.13
SAFB2-205ENST00000590000 INO80DQ53TQ3 878 aaPredicted RBP14.21□□□□□ -0.13
SAFB2-205ENST00000590000 LVRNQ6Q4G3 990 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 SPRED1Q7Z699 444 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 CCNJLQ8IV13 435 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 GLMNQ92990 594 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 USP7Q93009 1102 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 DNAJC7Q99615 494 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 NUP85Q9BW27 656 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 PACSIN1Q9BY11 444 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 SUV39H2Q9H5I1 410 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 DHX35Q9H5Z1 703 aaKnown RBP14.21□□□□□ -0.13
SAFB2-205ENST00000590000 LRRC19Q9H756 370 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 MRPL47Q9HD33 250 aaKnown RBP14.21□□□□□ -0.13
SAFB2-205ENST00000590000 WDR70Q9NW82 654 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 IL17BQ9UHF5 180 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 SCINQ9Y6U3 715 aa14.21□□□□□ -0.13
SAFB2-205ENST00000590000 WASH4PA8MWX3 477 aa14.2□□□□□ -0.14
SAFB2-205ENST00000590000 NVLO15381 856 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms